DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ocrl and SYNJ1

DIOPT Version :9

Sequence 1:NP_001259153.1 Gene:Ocrl / 31157 FlyBaseID:FBgn0023508 Length:850 Species:Drosophila melanogaster
Sequence 2:NP_003886.3 Gene:SYNJ1 / 8867 HGNCID:11503 Length:1612 Species:Homo sapiens


Alignment Length:786 Identity:196/786 - (24%)
Similarity:295/786 - (37%) Gaps:247/786 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RFKEDETIEYIFEA-YQIKGPEYSNRLLALVSSQSGGTFAIIAFSYLRTPLSSANELIINKVF-- 88
            ||:|      :|.: :.:.|..        :|....||.|:...:.|:....|....|.|..|  
Human   459 RFQE------VFRSMWSVNGDS--------ISKIYAGTGALEGKAKLKDGARSVTRTIQNNFFDS 509

  Fly    89 ----AID-------HNFQLRQDSKSSITTQQFDLSTAEDGPIKYYYYATESHHYEEFVAKVISFK 142
                |||       .|..|...:::.:||....:|                             :
Human   510 SKQEAIDVLLLGNTLNSDLADKARALLTTGSLRVS-----------------------------E 545

  Fly   143 STMAQHDPETVLNFRWLNDYRQIGEVKQELKKRESEYIVYKDIIIYCATWNVNN----KTCSDSN 203
            .|: |.....||.....|.|:               |...|.|.:...|||||.    ::.:..|
Human   546 QTL-QSASSKVLKSMCENFYK---------------YSKPKKIRVCVGTWNVNGGKQFRSIAFKN 594

  Fly   204 NPLRAWLACS-------------EKPPDIYAIGLQELDTPTKAMLNSTQVQAI----EKQWIDKM 251
            ..|..||..:             .||.||:|||.:|:     ..||:..:.:.    :|.|..::
Human   595 QTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAIGFEEM-----VELNAGNIVSASTTNQKLWAVEL 654

  Fly   252 MDSVHPDVEYEILMSHRLVATMLTVIVRKQLRQHIIRCRPKSVARGIFNTLGNKGGVAISLQLNE 316
            ..::..|.:|.:|.|.:||...|.|.:|.|....|......:|..|:....||||.|||.:..:.
Human   655 QKTISRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHT 719

  Fly   317 GNICFVNSHLAAHMGYVEERNQDYNAIVEGIRFDDGRTISDHDHIFWVGDLNYRIQEPPGQQRPG 381
            .::|||.||.||....|:|||:|:..|...:.|..||.:..||::||.||.||||..|  .:...
Human   720 TSLCFVCSHFAAGQSQVKERNEDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLP--NEEVK 782

  Fly   382 PLSDAQTYELLLQYDQLRQEMRRGKCFEGYTEGEIKFRPTYKYDPGTDNYDSSEKQRAPAYCDRV 446
            .|...|.::.|:..|||..:...|:.|.|:.||::.|.||||||..:|:||:|||.|.||:.|||
Human   783 ELIRQQNWDSLIAGDQLINQKNAGQVFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRV 847

  Fly   447 LWK--------------------------------GTRIEQLAYNSIMEIRQSDHKPVYA----- 474
            ||:                                ||    |.:....|::.|||:||.|     
Human   848 LWRRRKWPFDRSAEDLDLLNASFQDESKILYTWTPGT----LLHYGRAELKTSDHRPVVALIDID 908

  Fly   475 VFQVKVKTRDEVKYKRVQEEVLKAVDKRENDNQPQINVEKTVIDFGTVRFNEPSTRDFNVYNNCP 539
            :|:|:.:.|..: ||    ||:..      ...|.          |||..:..|:          
Human   909 IFEVEAEERQNI-YK----EVIAV------QGPPD----------GTVLVSIKSS---------- 942

  Fly   540 LPVDFSFKEKDIHAICEPWLHVDPRQDSLLIDSARSIRLKMNANVRTIAGLLRKIRASDNFDILI 604
            ||.:..|                   |..|||.                 ||::. ||....|||
Human   943 LPENNFF-------------------DDALIDE-----------------LLQQF-ASFGEVILI 970

  Fly   605 LHVENGRDIFIT-VTGDYQPSCFGLSMETMCRTDRPLSEYSQDQIKQLMNDESPEYRVTMPREFF 668
            ..||:  .:::| :.|....:...|:.:.:......::..|.|.||.|..:.|.| ::::     
Human   971 RFVED--KMWVTFLEGSSALNVLSLNGKELLNRTITIALKSPDWIKNLEEEMSLE-KISI----- 1027

  Fly   669 LLIDYLYRQGSKQVGAFPSYDSRLSLGAQFNSVRDWLDTWSD-DPFPANAETAAQALLLLLDLPE 732
                           |.||..|...||.......|: |...| |.:.|..|..         ||:
Human  1028 ---------------ALPSSTSSTLLGEDAEVAADF-DMEGDVDDYSAEVEEL---------LPQ 1067

  Fly   733 HALLEP 738
            |  |:|
Human  1068 H--LQP 1071

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OcrlNP_001259153.1 PH-like 23..163 CDD:302622 27/149 (18%)
INPP5c_INPP5B 185..478 CDD:197327 112/350 (32%)
RhoGAP_OCRL1 614..823 CDD:239845 27/127 (21%)
SYNJ1NP_003886.3 Syja_N 99..379 CDD:280532
INPP5c_Synj1 572..907 CDD:197332 111/345 (32%)
DUF1866 906..1047 CDD:286093 44/231 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5411
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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