DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ocrl and Sh2d1a

DIOPT Version :9

Sequence 1:NP_001259153.1 Gene:Ocrl / 31157 FlyBaseID:FBgn0023508 Length:850 Species:Drosophila melanogaster
Sequence 2:NP_001102783.2 Gene:Sh2d1a / 501502 RGDID:1562408 Length:126 Species:Rattus norvegicus


Alignment Length:47 Identity:11/47 - (23%)
Similarity:18/47 - (38%) Gaps:4/47 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SEAVANGTATAATRTTKDIVKERFKEDETI----EYIFEAYQIKGPE 47
            |...|.|......|..|:::....|.|:.|    :|..|....:.|:
  Rat    65 SAETAPGVHKRFFRKVKNLISAFQKPDQGIVTPLQYPVEKSSARSPQ 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OcrlNP_001259153.1 PH-like 23..163 CDD:302622 6/29 (21%)
INPP5c_INPP5B 185..478 CDD:197327
RhoGAP_OCRL1 614..823 CDD:239845
Sh2d1aNP_001102783.2 SH2_SAP1a 2..104 CDD:198263 9/38 (24%)
Interaction with FYN SH3 domain. /evidence=ECO:0000250|UniProtKB:O88890 67..92 5/24 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..126 3/12 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5411
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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