DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ocrl and Ocrl

DIOPT Version :9

Sequence 1:NP_001259153.1 Gene:Ocrl / 31157 FlyBaseID:FBgn0023508 Length:850 Species:Drosophila melanogaster
Sequence 2:NP_796189.2 Gene:Ocrl / 320634 MGIID:109589 Length:900 Species:Mus musculus


Alignment Length:707 Identity:242/707 - (34%)
Similarity:358/707 - (50%) Gaps:72/707 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 GEVKQELKKRESEYIVYKDIIIYCATWNVNNKTCSDSNNPLRAWLACSEKPPDIYAIGLQELDTP 230
            |.:|..|.|||.||:..:....:..|||||.::...|..|   ||.|...|||||.||.||||..
Mouse   220 GLIKHILTKREKEYVNIQSFRFFVGTWNVNGQSPDSSLEP---WLDCDPNPPDIYCIGFQELDLS 281

  Fly   231 TKAMLNSTQVQAIEKQWIDKMMDSVHPDVEYEILMSHRLVATMLTVIVRKQLRQHIIRCRPKSVA 295
            |:|......|:  |::|...:...:....:|..:...|||..||.:..||...|:|.....::..
Mouse   282 TEAFFYFESVK--EQEWSLAVERGLPSKAKYRKVQLVRLVGMMLLIFARKDQCQYIRDVATETTG 344

  Fly   296 RGIFNTLGNKGGVAISLQLNEGNICFVNSHLAAHMGYVEERNQDYNAIVEGIRFD-DGRT----- 354
            .||...:|||||||:....:....|.||||||||:...|.|||||..|...:.|. ..:|     
Mouse   345 TGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEEFERRNQDYKDICARMTFSVPNQTVPQVN 409

  Fly   355 ISDHDHIFWVGDLNYRIQEPPGQQRPGPLSDAQTYELLLQYDQLRQEMRRGKCFEGYTEGEIKFR 419
            |..||.:.|:||||||:..|...:....::..:.:: ||::|||..:..:.|.|..:.||||.|.
Mouse   410 IMKHDVVIWLGDLNYRLCMPDASEVKSLINKNELHK-LLKFDQLNIQRTQKKAFADFNEGEINFV 473

  Fly   420 PTYKYDPGTDNYDSSEKQRAPAYCDRVLWKGTRIEQLAYNSIMEIRQSDHKPVYAVFQVKVKTRD 484
            ||||||..||.:|||.|.|.||:|||:||:|..:.||.|.|.||::.||||||.|:|.:.||..|
Mouse   474 PTYKYDSKTDRWDSSGKCRVPAWCDRILWRGINVNQLHYRSHMELKTSDHKPVSALFHIGVKVVD 538

  Fly   485 EVKYKRVQEEVLKAVDKRENDNQPQINVEKTVIDFGTVRFNEPSTRDFNVYNNCPLPVDFSFKEK 549
            |.:|::|.|::::.:|:.|||..|.:.:.:....|..|:|.:.....|.:.||..:|..|||..|
Mouse   539 ERRYRKVFEDIVRIMDRMENDFLPSLELSRREFFFENVKFRQLQKEKFQISNNGQVPCHFSFIPK 603

  Fly   550 -DIHAICEPWLHVDPRQDSLLIDSARSIRLKMNANVRTIAGLLR---KIRASDNFDILILHVENG 610
             :....|:|||..:|.:..|..:....|.|.:..:..::..|..   ||.     |||:||::.|
Mouse   604 LNDSQYCKPWLRAEPFEGYLEPNETLDISLDVYVSKDSVTILNSGEDKIE-----DILVLHLDRG 663

  Fly   611 RDIFITVTGDYQPSCFGLSMETMCRTDRPLSEYSQDQIKQLMNDE-----------------SPE 658
            :|.|:|:.|:|.|||||.|:|.:||..||:.|....::..|..|.                 :.|
Mouse   664 KDYFLTIGGNYLPSCFGTSLEALCRMKRPIREVPVTKLIDLEEDSYLEKEKSLLQMVPLDEGTSE 728

  Fly   659 YRVTMPREFFLLIDYLYRQGSKQVGAF--PSYDSRLSLGAQFNSVRDWLDTWSDDPFPANAETAA 721
            ..:.:|:|.:||:|:|::....|...|  |.....|      ..:.|.|||...:..|.|..:.|
Mouse   729 RPLQVPKEIWLLVDHLFKYACHQEDLFQTPGMQEEL------QQIIDCLDTSIPETIPGNNHSVA 787

  Fly   722 QALLLLLDLPEHALLEPVV--ENLLECTNKSQ----AMDYISLLSPPKRNVFMHLCMFLRAGIES 780
            :|||:.|:    ||.|||:  |....|.:.:.    ....||.|....||||.:|..|||..::.
Mouse   788 EALLIFLE----ALPEPVICYELYQRCLDSAHDPRICKQVISQLPRCHRNVFRYLMAFLRELLKF 848

  Fly   781 QFY---DLHQVASTFGRILLR-----STERAAWMDYHSRCIQFMRLFIDTDVEAMGN 829
            ..|   :.:.:|:.|..:|||     .|.:......|:  |||:.:|:      :||
Mouse   849 SDYNNINTNMIATLFSSLLLRPPPNLMTRQTPNDRQHA--IQFLLVFL------LGN 897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OcrlNP_001259153.1 PH-like 23..163 CDD:302622
INPP5c_INPP5B 185..478 CDD:197327 121/298 (41%)
RhoGAP_OCRL1 614..823 CDD:239845 70/241 (29%)
OcrlNP_796189.2 PH_OCRL1 11..115 CDD:270182
Clathrin box 1 73..77
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..201
5-phosphatase. /evidence=ECO:0000250 236..562 132/331 (40%)
INPP5c_INPP5B 239..532 CDD:197327 121/298 (41%)
ASH. /evidence=ECO:0000250 563..677 33/117 (28%)
RhoGAP_OCRL1 667..895 CDD:239845 72/250 (29%)
Clathrin box 2 701..705 0/3 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 229 1.000 Domainoid score I2466
eggNOG 1 0.900 - - E1_COG5411
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H233
Inparanoid 1 1.050 403 1.000 Inparanoid score I1899
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54104
OrthoDB 1 1.010 - - D129921at33208
OrthoFinder 1 1.000 - - FOG0002633
OrthoInspector 1 1.000 - - otm43814
orthoMCL 1 0.900 - - OOG6_101357
Panther 1 1.100 - - LDO PTHR11200
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X494
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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