DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ocrl and syj1

DIOPT Version :10

Sequence 1:NP_569962.2 Gene:Ocrl / 31157 FlyBaseID:FBgn0023508 Length:850 Species:Drosophila melanogaster
Sequence 2:NP_596431.1 Gene:syj1 / 2540270 PomBaseID:SPBC2G2.02 Length:1076 Species:Schizosaccharomyces pombe


Alignment Length:450 Identity:140/450 - (31%)
Similarity:220/450 - (48%) Gaps:70/450 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 DPETVLNFRWLNDYRQIGEVKQELKKRESEYIVYKDIIIYCATWNVNNKTCSDSNNPLRAWLACS 213
            |...|:.:..:::|     |..||:|||:|:..:|::.|:.|::|:|.  || :...|..||...
pombe   527 DQHPVILYDPIHEY-----VNHELRKRENEFSEHKNVKIFVASYNLNG--CS-ATTKLENWLFPE 583

  Fly   214 EKP-PDIYAIGLQELDTPTKAMLNSTQVQAIEKQW---IDKMMD---SVHPDVEYEILMSHRLVA 271
            ..| .|||.:|.||:...|...:.|.. .|..::|   :.::::   :..|.  |..|.|.:||.
pombe   584 NTPLADIYVVGFQEIVQLTPQQVISAD-PAKRREWESCVKRLLNGKCTSGPG--YVQLRSGQLVG 645

  Fly   272 TMLTVIVRKQLRQHIIRCRP--KSV-----ARGIFNTLGNKGGVAISLQLNEGNICFVNSHLAAH 329
            |.|.:..::.       |.|  |:|     ..|:....||||.|||.....:..:||:.|||||.
pombe   646 TALMIFCKES-------CLPSIKNVEGTVKKTGLGGVSGNKGAVAIRFDYEDTGLCFITSHLAAG 703

  Fly   330 MGYVEERNQDYNAIVEGIRFDDGRTISDHDHIFWVGDLNYRIQEPPGQQRP----GPLSDAQTYE 390
            ....:||:.||..|..|:||..||:|.:||::.|.||.||||.....:..|    |.||      
pombe   704 YTNYDERDHDYRTIASGLRFRRGRSIFNHDYVVWFGDFNYRISLTYEEVVPCIAQGKLS------ 762

  Fly   391 LLLQYDQLRQEMRRGKCFEGYTEGEIKFRPTYKYDPGTDNYDSSEKQRAPAYCDRVLWKGTRIEQ 455
            .|.:||||.::|..||.|..::|..|.|.||||:|.|||.||:|:|.|.||:.||:|::|..:..
pombe   763 YLFEYDQLNKQMLTGKVFPFFSELPITFPPTYKFDIGTDIYDTSDKHRVPAWTDRILYRGELVPH 827

  Fly   456 LAYNSIMEIRQSDHKPVYAVFQVKVKTRDEVKYKRVQEEVLKAVDKRENDNQPQINVEKTVIDF- 519
             :|.|: .:..|||:|:||.::..:...|..|.|.:.||:   .::|:.:.:.......|:||. 
pombe   828 -SYQSV-PLYYSDHRPIYATYEANIVKVDREKKKILFEEL---YNQRKQEVRDASQTSYTLIDIA 887

  Fly   520 ----------------GTVRFNEPSTRDFNVYNNCPLPVDFSFKEKDIHAICEPWLHVDP 563
                            |..:..:||:.....:.:..||.      |.|.|...|...::|
pombe   888 GSVAGKPNLIPHLPANGVDKIKQPSSERSKWWFDDGLPA------KSIAAPPGPEYRLNP 941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OcrlNP_569962.2 INPP5B_PH 23..160 CDD:465268 2/10 (20%)
INPP5c_INPP5B 185..478 CDD:197327 110/310 (35%)
RhoGAP_OCRL1 614..823 CDD:239845
syj1NP_596431.1 COG5329 1..582 CDD:227637 20/62 (32%)
COG5411 529..981 CDD:227698 138/447 (31%)
Blue background indicates that the domain is not in the aligned region.

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