DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2Bepsilon and PSA1

DIOPT Version :9

Sequence 1:NP_569961.2 Gene:eIF2Bepsilon / 31156 FlyBaseID:FBgn0023512 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_010228.1 Gene:PSA1 / 851504 SGDID:S000002213 Length:361 Species:Saccharomyces cerevisiae


Alignment Length:415 Identity:81/415 - (19%)
Similarity:154/415 - (37%) Gaps:123/415 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KPLSDEGSTALLPLVNVRMLDYALMALNRSGVEEVFVYTSLYRSSI---------REHIRAGIAT 78
            |||.:.|        |..|:.:.:.||..:||.::.:..: ||..:         :|:   |:..
Yeast    23 KPLVEFG--------NRPMILHQIEALANAGVTDIVLAVN-YRPEVMVETLKKYEKEY---GVNI 75

  Fly    79 DAAWSFKMTVHVIGGEGCRCFGDAMRDLDNKALIRGHFILLGADTVTNADLRPVLEQHKRQAKFD 143
                :|.:....:|..|.....:.:...||..     |.:|.:|.:.....:.:.:.||  |...
Yeast    76 ----TFSVETEPLGTAGPLKLAEDVLKKDNSP-----FFVLNSDVICEYPFKELADFHK--AHGG 129

  Fly   144 KGT-AATLV-----FKECANNVRTGNEVLIAVDRRNDRLHYHQRLRMHHKENRYQLPLDVFLGNS 202
            ||| .||.|     :....:::.|.|    .:||..::          .||         |:||.
Yeast   130 KGTIVATKVDEPSKYGVIVHDIATPN----LIDRFVEK----------PKE---------FVGNR 171

  Fly   203 CVALHHNLLDPQIAIGSPSMLSLFNDNFDFQTRDDFVRGLLINEELLDSRIYVALLPAAQYAHKV 267
                    ::..:.|.:|.::.|.........::.|  .:|:.|:                    
Yeast   172 --------INAGLYILNPEVIDLIEMKPTSIEKETF--PILVEEK-------------------- 206

  Fly   268 NNWPAYQLVSRDIINRWAYPFVPDIGLYK--LQQEYVFHKDNIYKSPEAHVSKVALLQNVVIEAG 330
                  ||.|.|:...|.     |:|..|  |....::......:.|:...:...::.|.:|:..
Yeast   207 ------QLYSFDLEGFWM-----DVGQPKDFLSGTVLYLNSLAKRQPKKLATGANIVGNALIDPT 260

  Fly   331 SHVDSGSVIS-DSVIGANCRIGKNCRLTNAFLMADVTVMDN-----------------CRLEH-C 376
            :.:.|.:.|. |.|||.|..||...|:|.:.::.:.|:.::                 ||||. .
Yeast   261 AKISSTAKIGPDVVIGPNVTIGDGVRITRSVVLCNSTIKNHSLVKSTIVGWNSTVGQWCRLEGVT 325

  Fly   377 VVGEGAIINEDCDVSAGCVLGAKSV 401
            |:|:...:.::..::.|.||..||:
Yeast   326 VLGDDVEVKDEIYINGGKVLPHKSI 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2BepsilonNP_569961.2 eIF-2B_epsilon_N 9..223 CDD:133040 42/214 (20%)
GCD1 22..409 CDD:224129 81/415 (20%)
LbetaH 326..397 CDD:294107 21/89 (24%)
W2_eIF2B_epsilon 499..659 CDD:211396
PSA1NP_010228.1 M1P_guanylylT_B_like_N 1..234 CDD:133047 55/297 (19%)
LbetaH 256..335 CDD:412191 19/78 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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