DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2Bepsilon and AT4G18300

DIOPT Version :9

Sequence 1:NP_569961.2 Gene:eIF2Bepsilon / 31156 FlyBaseID:FBgn0023512 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_193564.1 Gene:AT4G18300 / 827556 AraportID:AT4G18300 Length:709 Species:Arabidopsis thaliana


Alignment Length:727 Identity:198/727 - (27%)
Similarity:353/727 - (48%) Gaps:106/727 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KEIVQAVLIADNNVWNFKPLSDEGSTALLPLVNVRMLDYALMALNRSGVEEVFVYTSLYRSSIRE 70
            ::.:||:|:||:....|:.::.|....|||:||:.|:||.|..|..:|:|||||:...:.|.|.:
plant    21 RQRLQAILLADSFTTQFRSITLERPKVLLPIVNIPMIDYTLAWLESAGIEEVFVFCCAHSSQIID 85

  Fly    71 HIRAGIATDAAWSFK----MTVHVIGGEGCRCFGDAMRDL----DNKALIRGHFILLGADTVTNA 127
            :::     .:.|..:    :.|..|........|||:|.:    ...:.|:|.|:|:..|||:|.
plant    86 YLK-----KSEWYTRPNPNLLVRTIVSHNSTSVGDALRYIYEQQTETSQIQGDFVLVSGDTVSNM 145

  Fly   128 DLRPVLEQHKRQAKFDKGTAATLVFKECANNVRTGNEVLIAVDRRNDRLHYHQRLRMHHKENRYQ 192
            .|..:::||:.:.|.|:....|:|||:.:......:::.:|||....:|       :|::|...:
plant   146 PLADLIQQHRDRKKKDEKAIMTMVFKKQSRLGIGSDQLFVAVDPLTKQL-------LHYEECNSR 203

  Fly   193 ---LPLDVFLGNSCVALHHNLLDPQIAIGSPSMLSLFNDNFDFQ-TRDDFVRGLLINEELLDSRI 253
               ..||..|.:|.| |..::.|..|.|.||.:||||.||||:| .|..||.|||: ::::..:|
plant   204 GGDFCLDKSLLDSTV-LCSDMQDCYIDICSPEVLSLFEDNFDYQHMRRHFVNGLLV-DDIMGYKI 266

  Fly   254 YVALLPAAQYAHKVNNWPAYQLVSRDIINRWAYPFVPDIGLYKLQQEYVFHKDNIYKSPEA---H 315
            :...:.::.||.:::|..:|..||:|||.||.||:||:|. :...:.....:..||::.:|   |
plant   267 FTHEIQSSCYAARIDNLRSYDTVSKDIIQRWTYPYVPNID-FSGNRPVKLGRRGIYRASDAVQSH 330

  Fly   316 VSKVALLQNVVIEAGSHVDSGSVISDSVIGANCRIGKNCRLTNAFLMADVTVMDNCRLEHCVVGE 380
            .:.|.  .:.||..|:.:.:|..|.:||||..|.||.|..:..:::..:||:.|.|.:.:.:|.:
plant   331 TADVG--ASTVIGYGTKIGNGGKIYNSVIGNGCCIGSNVVIQGSYIWNNVTIEDGCEIRNAIVCD 393

  Fly   381 ------GAIINEDCDVSAGCVLGAKSVLPAKKTLAKTLITRTPSRRRSDDEVVVELKSIG--PHA 437
                  ||::.....:|...|:|...|:||   .:|..:.:.|:...||:|:.....|.|  .|:
plant   394 GVKVRAGAVLQPGVVLSFSVVVGRDFVVPA---YSKVSLLQQPTTEDSDEELEYADSSSGTADHS 455

  Fly   438 YIVSDLTTGDPEDSECEDLLPQ---------------------QPLSIPKMGDLLAPLDEISYCS 481
            ..:::|..    :|:..:|.|.                     .|:.:.|:.|:...:|:     
plant   456 SGLNNLQI----ESKASELGPDGAGYIWEICDSAHDEEWKHSVVPIPMDKLADITGAMDD----- 511

  Fly   482 DFSEDDEDASRAVTP----LPDDTNI-----------FLGEVIDSLTRGFREKSNPDFLVLEINS 531
            |..|||     .|.|    |..||:|           |..||.:.......:.:..|.::..|||
plant   512 DDIEDD-----IVVPPSGELKSDTDIINTDANDSYGDFEREVEEEFLSAVEKDNKADIVIPLINS 571

  Fly   532 SRYAYNMSLKEVNFNVVKAVFGMQ---SIVEPANDNVLVAINA--AFKQLGPVVSNYIKSEDSMM 591
            .|.||||.    :.:...|||...   ::..|.|....:..||  ...:...|:..|:|..|:.:
plant   572 HRLAYNMD----SADCAGAVFYSMMRLAVKSPHNSATELYRNAMGVITKWKGVLGFYLKQTDAQI 632

  Fly   592 DCLKALEDVYEENHLVRGKISQIVHYLYDKDFVSESAIQAW---YAQLDEEEHAHLRQSLAKLVA 653
            :.:...|::.:|:..:....::::.:|||||.|.|.||..|   .|..|:.:..:|.: ....:.
plant   633 EVIMKFEEMCQESEELSPLFAKLLPFLYDKDVVQEDAILRWGEEKAGADDCDKVYLNK-CESFIK 696

  Fly   654 WLDQSSEEDDDE 665
            ||.::|||::::
plant   697 WLKEASEEEEED 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2BepsilonNP_569961.2 eIF-2B_epsilon_N 9..223 CDD:133040 66/224 (29%)
GCD1 22..409 CDD:224129 124/407 (30%)
LbetaH 326..397 CDD:294107 22/76 (29%)
W2_eIF2B_epsilon 499..659 CDD:211396 43/178 (24%)
AT4G18300NP_193564.1 eIF-2B_epsilon_N 24..236 CDD:133040 66/224 (29%)
LbH_eIF2B_epsilon 339..417 CDD:100061 22/77 (29%)
W2_eIF2B_epsilon 539..702 CDD:211396 40/167 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 86 1.000 Domainoid score I2784
eggNOG 1 0.900 - - E1_COG1208
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2903
Inparanoid 1 1.050 255 1.000 Inparanoid score I1005
OMA 1 1.010 - - QHG54474
OrthoDB 1 1.010 - - D369837at2759
OrthoFinder 1 1.000 - - FOG0003779
OrthoInspector 1 1.000 - - otm2874
orthoMCL 1 0.900 - - OOG6_101778
Panther 1 1.100 - - O PTHR45887
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2634
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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