DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2Bepsilon and APL4

DIOPT Version :10

Sequence 1:NP_569961.2 Gene:eIF2Bepsilon / 31156 FlyBaseID:FBgn0023512 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_179753.1 Gene:APL4 / 816697 AraportID:AT2G21590 Length:523 Species:Arabidopsis thaliana


Alignment Length:501 Identity:94/501 - (18%)
Similarity:169/501 - (33%) Gaps:174/501 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AQFEK-----EIVQAVLIADNNVWNFKPLSDEGSTALLPLVN-VRMLDYALMALNRSGVEEVFVY 60
            :.||:     :.|.|:::...|.....||:...:|..:|:.. .|::|..:.....|.:.::||.
plant    79 SMFERRKVDPQNVAAIILGGGNGAKLFPLTMRAATPAVPVGGCYRLIDIPMSNCINSCINKIFVL 143

  Fly    61 TSLYRSSIREHIRA---GIATDAAWSFKMTVHVI------GGEGCRCF---GDAMR-------DL 106
            |....:|:..|:..   |...:....|   |.|:      |..|.:.|   .||:|       |.
plant   144 TQFNSASLNRHLARTYFGNGINFGGGF---VEVLAATQTPGEAGKKWFQGTADAVRKFLWVFEDA 205

  Fly   107 DNKALIRGHFILLGADTVTNADLRPVLEQHKRQAKFDKGTAATLVFKECA--NNVRTGNEVLIAV 169
            .|:.:  .:.::|..|.:...:....::.|     .|.....||   .||  :..|..|..|:.:
plant   206 KNRNI--ENILILSGDHLYRMNYMDFVQSH-----VDSNADITL---SCAPVSESRASNFGLVKI 260

  Fly   170 DRRNDRLHYHQRLRMHHKENRYQLPLDVFL-----GNSCVALHHNLLDPQIAIGSPSMLSLFNDN 229
            ||....:|:.::            |..|.|     ..:.:.|.|     |.|..||.:.|:  ..
plant   261 DRGGRVIHFSEK------------PTGVDLKSMQTDTTMLGLSH-----QEATDSPYIASM--GV 306

  Fly   230 FDFQTRDDFVRGLLINEELLDSRIYVALLPAAQYAHKVNNWPAYQLVSRDIINRWAYPFVPDIGL 294
            :.|:|  :.:..||..:....:.....::|||...|.|..:     :.||.   |     .|||.
plant   307 YCFKT--EALLNLLTRQYPSSNDFGSEVIPAAIRDHDVQGY-----IFRDY---W-----EDIGT 356

  Fly   295 YKLQQEYVFHKDNI------------------YKSP--------------EAHVSKVALL----- 322
            .|     .|::.|:                  |.||              ::.:|....|     
plant   357 IK-----TFYEANLALVEERPKFEFYDPETPFYTSPRFLPPTKAEKCRMVDSIISHGCFLRECSV 416

  Fly   323 QNVVIEAGSHVDSGSVISDS------------------------------------VIGANCRIG 351
            |..:|...|.:|.|..:.|:                                    :|..|.:||
plant   417 QRSIIGERSRLDYGVELQDTLMLGADYYQTESEIASLLAEGKVPIGIGKDTKIRKCIIDKNAKIG 481

  Fly   352 KNCRLTNA-------------FLMADVTVMDNCRLEHCVVGEGAII 384
            ||..:.|.             ::.:.:||:    :|...:.:|.:|
plant   482 KNVIIMNKGDVQEADRPEEGFYIRSGITVI----VEKATIQDGTVI 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2BepsilonNP_569961.2 eIF-2B_epsilon_N 9..223 CDD:133040 50/240 (21%)
LbetaH 326..397 CDD:469633 17/108 (16%)
W2_eIF2B_epsilon 499..659 CDD:211396
APL4NP_179753.1 PLN02241 88..523 CDD:215133 91/490 (19%)
Blue background indicates that the domain is not in the aligned region.

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