DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2Bepsilon and CG1129

DIOPT Version :9

Sequence 1:NP_569961.2 Gene:eIF2Bepsilon / 31156 FlyBaseID:FBgn0023512 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001189177.2 Gene:CG1129 / 40599 FlyBaseID:FBgn0037279 Length:369 Species:Drosophila melanogaster


Alignment Length:469 Identity:82/469 - (17%)
Similarity:161/469 - (34%) Gaps:145/469 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QAVLIADNNVWNFKPLSDEGSTALLPLVNVRMLDYALMALNRSGVEEVFVYTSLYRSSIREHIRA 74
            :|:::........:||:......|:...|..:|.:.|.||..:|..:|.:..| ||:   |.:..
  Fly    12 RALILVGGYGTRLRPLTLSTPKPLVEFANKPILLHQLEALVDAGCRQVILAVS-YRA---EQMEK 72

  Fly    75 GIATDAAWSFKMTVHVIGGEGCRCFGDAMRDLDNKALIRGH---FILLGADTVTNADLRPVLEQH 136
            .:..:|.   |:.|.:|........|.|......|.::...   |.:|.:|.:.:...:.:::.|
  Fly    73 ELKVEAK---KLGVELIFSHETEPLGTAGPLALAKTILAASSEPFFVLNSDVICDFPFKQLVQFH 134

  Fly   137 KRQAKFDKGTAATLVFKECANNVRTGNEVLIAVDRRNDRLHYHQRLRMHHKENRYQLPLDVFLGN 201
                               .|:.:.|..|:..|:                :.::|.:.|  :..|
  Fly   135 -------------------CNHGKEGTIVVTKVE----------------EPSKYGVVL--YDEN 162

  Fly   202 SCV--------ALHHNLLDPQIAIGSPSMLSLFNDNFDFQTRDDFVRGLLINEELLDSRIYVALL 258
            .|:        ....|.::..|.|.:||:|    |..:       |:...|.:|:.....     
  Fly   163 GCIKNFIEKPQEFVSNKINAGIYIFNPSVL----DRIE-------VKPTSIEKEVFPEMT----- 211

  Fly   259 PAAQYAHKVNNWPAYQLVSRDIINRWAYPFVPDIG------------LYKLQQEYVFHKDNIYKS 311
                        ...:|.:.|:...|.     |||            |..|:|:   ....:|..
  Fly   212 ------------QQQELYAMDLTGFWM-----DIGQPKDFLTGMCLYLSSLRQK---QSPKLYTG 256

  Fly   312 PEAHVSKVALLQNVVIEAGSHVDSGSVISDSVIGANCRIGKNCRLTNAFLMADVTVMDNCRLEHC 376
            |       .::.||:::           ..:.||..||||.|..:.     .||.:.|...::..
  Fly   257 P-------GVVGNVLVD-----------PTAKIGEGCRIGPNVTIG-----PDVVIEDGVCIKRS 298

  Fly   377 VVGEGAIINEDCDVSAGCVLGAKSV------LPAKKTLAKTLITRTPSRRRSDDEVVVELKSIGP 435
            .:.:|||:.....:.: |::|.:|.      :.....|.:.:|.:        ||:.:....:.|
  Fly   299 TILKGAIVRSHSWLDS-CIVGWRSTVGRWVRIEGITVLGEDVIVK--------DELYINGGQVLP 354

  Fly   436 HAYIVSDLTTGDPE 449
            |..|.:.:    ||
  Fly   355 HKSIAASV----PE 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2BepsilonNP_569961.2 eIF-2B_epsilon_N 9..223 CDD:133040 39/223 (17%)
GCD1 22..409 CDD:224129 72/415 (17%)
LbetaH 326..397 CDD:294107 14/70 (20%)
W2_eIF2B_epsilon 499..659 CDD:211396
CG1129NP_001189177.2 GCD1 12..361 CDD:224129 80/460 (17%)
M1P_guanylylT_B_like_N 12..242 CDD:133047 50/306 (16%)
LbetaH 264..343 CDD:294107 18/103 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456494
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1208
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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