DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2Bepsilon and eif2b3

DIOPT Version :9

Sequence 1:NP_569961.2 Gene:eIF2Bepsilon / 31156 FlyBaseID:FBgn0023512 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_957368.1 Gene:eif2b3 / 394049 ZFINID:ZDB-GENE-040426-1039 Length:453 Species:Danio rerio


Alignment Length:486 Identity:105/486 - (21%)
Similarity:170/486 - (34%) Gaps:155/486 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VQAVLIADNNVWNFKPLSDEGSTALLPLVNVRMLDYALMALNRSGVEEVFVYTSLYRSSIREHIR 73
            :||||:|.........|:......|||:.|..::.|.|..|.|.|.|||.|.|:       :.::
Zfish     3 LQAVLMAAGGGSRMMDLTYNTPKPLLPVGNKPLIWYPLNLLERVGFEEVIVITT-------KEVQ 60

  Fly    74 AGIATDAAW----SFKMTVHVIGGEGCRCFGDAMRDLDNKALIRGHFILLGADTVTNADLRPVLE 134
            ..::||...    ..|:.|..|..|......||:|.:..|  |:...::|..|.:|:..|..|::
Zfish    61 KALSTDQRLKTDVKMKLDVVCIQEEADMGTADALRHIQQK--IKTDILVLSCDLITDVALHEVVD 123

  Fly   135 QHKRQAKFDKGTAATLVFK--ECANNV-------RTGNE-VLIAVDRRNDRLHYHQRLRMHHKEN 189
            ..:..    ..|.:.|:.|  |....|       :.|.: ..:.||....||.:        ..|
Zfish   124 LFRAH----NATLSMLMSKVHEFTETVPGQKGKKKAGEQRDFVGVDVTGKRLLF--------MAN 176

  Fly   190 RYQLPLDVFLGNSCVALH------HNLLDPQI----------AIGSPSMLSLFNDNFDFQTRDDF 238
            ...|...:.|..|.:..|      ..|||..:          .:.:.|:.|:..:...:..|..|
Zfish   177 EADLEEGLVLRKSIMRKHPRMFIKTGLLDAHLYCLKRSVVDFLVHNKSVTSIRGELVPYLVRKQF 241

  Fly   239 VRGL------------------LINEELLDSRIYVALLPAAQ----------------------- 262
            .:.|                  .||.:||.:....|||..|:                       
Zfish   242 SKSLNSQHVTEDSEKNQKQQEAHINMDLLSTSKDEALLQLARERSCWNDHRGDMSEAYHGGKIRC 306

  Fly   263 YAH--------KVNNWPAYQLVSRDIINRWAYPFVPDIGLYKLQQEYVFHKDNIYKSPEAHVSKV 319
            |.|        :||...||...:|         .||     ||.:|...|       |.|.||:.
Zfish   307 YVHIMEDGMCYRVNTLAAYIEANR---------VVP-----KLFEEPPIH-------PTAVVSER 350

  Fly   320 ALLQNVVIEAGSHVDSGSVISDSVIGANCRIG-----------------KNCRLTNAFLMADVTV 367
            :|                |.|||:||.:|:|.                 :..::||:.:|..||:
Zfish   351 SL----------------VGSDSIIGPSCQISDKTSIKRSNVGTSTVIKEKVKITNSIIMNGVTI 399

  Fly   368 MDNCRLEHCVVGEGAIINEDCDVSAGCVLGA 398
            .:.|.::..|:...|:|....|:.. |::|:
Zfish   400 EEGCNIQGSVICSHAVIGRGADIKY-CLVGS 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2BepsilonNP_569961.2 eIF-2B_epsilon_N 9..223 CDD:133040 55/243 (23%)
GCD1 22..409 CDD:224129 100/473 (21%)
LbetaH 326..397 CDD:294107 19/87 (22%)
W2_eIF2B_epsilon 499..659 CDD:211396
eif2b3NP_957368.1 GCD1 2..430 CDD:224129 105/486 (22%)
eIF-2B_gamma_N 3..216 CDD:133041 54/233 (23%)
LbH_eIF2B_gamma_C 358..438 CDD:100057 16/73 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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