DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF2Bepsilon and gmppab

DIOPT Version :9

Sequence 1:NP_569961.2 Gene:eIF2Bepsilon / 31156 FlyBaseID:FBgn0023512 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_956791.1 Gene:gmppab / 393469 ZFINID:ZDB-GENE-040426-1550 Length:422 Species:Danio rerio


Alignment Length:455 Identity:88/455 - (19%)
Similarity:165/455 - (36%) Gaps:131/455 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FKPLSDEGSTALLPLVNVRMLDYALMA---------------------LNRSGVEEVFVYTSLYR 65
            |:|||.|....|.|:..|.||.:.:.|                     |||      |:|:    
Zfish    17 FRPLSFEVPKPLFPVAGVPMLQHHIEACAQVPDMKEIMLIGFYQPNDELNR------FIYS---- 71

  Fly    66 SSIREHIRAGIATDAAWSFKMTVHVIGGEGCRCFGDAMRDLDNKALIRG--HFILLGADTVTNAD 128
                          |...||:.:..:........|..:....::.|..|  .|.|:.||..:...
Zfish    72 --------------AQQEFKIPIRYLQEFAALGTGGGIYHFRDQILSGGPAAFFLMNADVCSEFP 122

  Fly   129 LRPVLEQHKRQAKFDKGTAATLVFKECANNVRTGNEVLIAVDRR-NDRLHYHQRLRMHHKENRYQ 192
            |..:|:.|::..:...|    ::....||..::.|...|..:.. |:.||:.::           
Zfish   123 LLEMLQFHRQHGENHCG----VLLGTTANRTQSLNYGCIVENHETNEVLHFVEK----------- 172

  Fly   193 LPLDVFLGNSCVALHHNLLDPQIAIGSPSMLS----LFNDNFDFQTRDDFVRGLLINEEL-LDSR 252
             | ..|:.        ::::..|.:.:|.:.:    :|..|...:.:::...|..:.|.: |:..
Zfish   173 -P-STFVS--------DIINCGIYLFTPDIFAHIGKVFQRNQQEKIQEELTHGRQMPEVVRLEQD 227

  Fly   253 IYVALLPAAQ---YAHKVNN-WPAYQLVSRDIINRWAYPFVPDIGLYKLQQEYVFHKDNIYKSPE 313
            |:.||  |.|   :.:|..: |...:.....|.....|          |:|.:..|.:.: .:.:
Zfish   228 IFTAL--AGQKKLFVYKTQHFWSQIKSAGSAIYASRLY----------LKQYHQTHPERL-ATNQ 279

  Fly   314 AHVSKVALLQNVVIEAGSHVDSGSVISDSVIGANCRIGKNCRLTNAFLMADVTVMDNCRLEHCVV 378
            ....|:.  .:|.|...:::|     ..:|:|.|..|||.           ||:....|:...::
Zfish   280 GGTPKIT--GDVYIHPTANID-----PSAVLGPNVSIGKG-----------VTIGGGVRVRESII 326

  Fly   379 GEGAIINEDCDVSAGCVLGAKSVLPAKKTLAK-TLITRTPSRRRSDDEVVVELKSIGPHAYIVSD 442
            ..||::.:.|     |||  .|::....|:.| ..:..|||....:|          |:|.|.|:
Zfish   327 LHGAVLQDHC-----CVL--NSIVGWDSTVGKWARVEGTPSDPNPND----------PYAKIDSE 374

  Fly   443  442
            Zfish   375  374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2BepsilonNP_569961.2 eIF-2B_epsilon_N 9..223 CDD:133040 41/224 (18%)
GCD1 22..409 CDD:224129 79/419 (19%)
LbetaH 326..397 CDD:294107 16/70 (23%)
W2_eIF2B_epsilon 499..659 CDD:211396
gmppabNP_956791.1 GCD1 1..351 CDD:224129 79/420 (19%)
M1P_guanylylT_A_like_N 4..263 CDD:133050 54/296 (18%)
LbetaH 291..357 CDD:294107 20/88 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.