DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2Bepsilon and Gmppb

DIOPT Version :9

Sequence 1:NP_569961.2 Gene:eIF2Bepsilon / 31156 FlyBaseID:FBgn0023512 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001344611.1 Gene:Gmppb / 331026 MGIID:2660880 Length:360 Species:Mus musculus


Alignment Length:439 Identity:78/439 - (17%)
Similarity:157/439 - (35%) Gaps:136/439 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VQAVLIADNNVWNFKPLSDEGSTALLPLVNVRMLDYALMALNRSGVEEVFVYTSLYRSSIREHIR 73
            ::|:::........:||:......|:...|..:|.:.:.||..:||:.|.:..|.....:.:.::
Mouse     1 MKALILVGGYGTRLRPLTLSTPKPLVDFCNKPILLHQVEALAAAGVDHVILAVSYMSQMLEKEMK 65

  Fly    74 A-----GIATDAAWSFKMTVHVIGGEGCRCFGDAMRDLDNKALIRGHFILLGADTVTNADLRPVL 133
            |     ||..    |.......:|..|.....   |||.::.  ...|.:|.:|.:.:...:.::
Mouse    66 AQEQRLGIRI----SMSHEEEPLGTAGPLALA---RDLLSET--ADPFFVLNSDVICDFPFQAMV 121

  Fly   134 EQHKRQAKFDKGTAATLVFKECANNVRTGNEVLIAVDRRNDRLHYHQRLRMHHKENRYQLPLDVF 198
            :.|:..     |...:::..:.....:.|   ::..:....|:|            |:.....||
Mouse   122 QFHRHH-----GQEGSILVTKVEEPSKYG---VVVCEADTGRIH------------RFVEKPQVF 166

  Fly   199 LGNSCVALHHNLLDPQIAIGSPSMLSLFNDNFDFQTRDDFVRGLLINEELLDSRIYVALLPAAQ- 262
            :.|.        ::..:.|.||::|                :.:.:....::..|:..:....| 
Mouse   167 VSNK--------INAGMYILSPAVL----------------QRIQLKPTSIEKEIFPVMAKEGQL 207

  Fly   263 YAHKVNNWPAYQLVSRDIINRWAYPFVPDIG------------LYKLQQEYVFHKDNIYK----- 310
            ||.::..:             |.     |||            |..|:|:   |.:.:|.     
Mouse   208 YAMELQGF-------------WM-----DIGQPKDFLTGMCLFLQSLRQK---HPERLYSGPGIV 251

  Fly   311 -----SPEAHVSK-------VALLQNVVIEAG-----------SHVDSGSVISDSVIGANCRIGK 352
                 .|.|.:.:       |:|...||:|.|           :|:.|.|.:...::|..||:|:
Mouse   252 GNVLVDPSARIGQNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDAHIRSHSWLESCIVGWRCRVGQ 316

  Fly   353 NCRLTNAFLMADVTVMDNCRLEHCVVGEGAIINEDCDVSAGCVLGAKSV 401
            ..|:.|      |||:          ||..|:|::..::...||..||:
Mouse   317 WVRMEN------VTVL----------GEDVIVNDELYLNGASVLPHKSI 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2BepsilonNP_569961.2 eIF-2B_epsilon_N 9..223 CDD:133040 36/218 (17%)
GCD1 22..409 CDD:224129 77/426 (18%)
LbetaH 326..397 CDD:294107 20/81 (25%)
W2_eIF2B_epsilon 499..659 CDD:211396
GmppbNP_001344611.1 M1P_guanylylT_B_like_N 1..233 CDD:133047 45/302 (15%)
LbetaH 255..334 CDD:381831 23/94 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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