DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2Bepsilon and tag-335

DIOPT Version :9

Sequence 1:NP_569961.2 Gene:eIF2Bepsilon / 31156 FlyBaseID:FBgn0023512 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_502333.2 Gene:tag-335 / 183400 WormBaseID:WBGene00016583 Length:365 Species:Caenorhabditis elegans


Alignment Length:458 Identity:84/458 - (18%)
Similarity:152/458 - (33%) Gaps:158/458 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VQAVLIADNNVWNFKPLSDEGSTALLPLVNVRMLDYALMALNRSGVEEVFVYTSLYRSSIREHIR 73
            ::|:::........:||:......|:...|..|:.:.:.||...||:.|.:..| ||:...|.  
 Worm     1 MKALILVGGYGTRLRPLTLTQPKPLVEFANKPMMLHQMEALAEVGVDTVVLAVS-YRAEQLEQ-- 62

  Fly    74 AGIATDAAWSFKMTVHV---------------IGGEGCRCFGDAMRDLDNKALIRGH------FI 117
                       :||||.               :|..|            ..||.|.|      |.
 Worm    63 -----------EMTVHADRLGVKLIFSLEEEPLGTAG------------PLALARKHLEGDAPFF 104

  Fly   118 LLGADTVTNADLRPVLEQHKRQAKFDKGTAATLVFKECANNVRTGNEVLIAVDRRNDRLHYHQRL 182
            :|.:|.:.:...:.::|.||...|  :||.|....:|.:   :.|   ::..|:...::......
 Worm   105 VLNSDVICDFPFKQMVEFHKNHGK--EGTIAVTKVEEPS---KYG---VVVFDQDKGKIDDFVEK 161

  Fly   183 RMHHKENRYQLPLDVFLGN--SCVALHHNLLDPQIAIGSPSMLSLFNDN----------FDFQTR 235
            ...:..|:....|.:|...  ..:.|....::.:|   .|.|  .|:.|          .|....
 Worm   162 PQEYVGNKINAGLYIFSSKILDRIPLKPTSIEKEI---FPEM--AFSGNLYAFVLPGFWMDVGQP 221

  Fly   236 DDFVRG--LLINEELLDSRIYVALLPAAQYAHKVNNWPAYQLVSRDIINRWAYPFVPDIGLYKLQ 298
            .||::|  |.:|                 :.|...:                         .||:
 Worm   222 KDFLKGMSLFLN-----------------HCHTTKS-------------------------DKLE 244

  Fly   299 QEYVFH-----KDNIYKSPEAHVSK-------VALLQNVVIEAGSHVDSGSVISD---------- 341
            .....|     :.|:...|.|.|.:       |.:...|.||.|..:...:::||          
 Worm   245 TGSNIHPTATIRGNVMVDPSATVGENCVIGPDVVIGPRVKIEGGVRILHSTILSDSSIGNYSWVS 309

  Fly   342 -SVIGANCRIGKNCRLTNAFLMADVTVMDNCRLEHCVVGEGAIINEDCDVSAGCVLGAKSV---L 402
             |::|..|.||...|:.|.                ||:|:..::.::..::...||..||:   :
 Worm   310 GSIVGRKCHIGSWVRIENI----------------CVIGDDVVVKDELYLNGASVLPHKSIAVNV 358

  Fly   403 PAK 405
            |:|
 Worm   359 PSK 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2BepsilonNP_569961.2 eIF-2B_epsilon_N 9..223 CDD:133040 44/236 (19%)
GCD1 22..409 CDD:224129 83/445 (19%)
LbetaH 326..397 CDD:294107 16/81 (20%)
W2_eIF2B_epsilon 499..659 CDD:211396
tag-335NP_502333.2 GCD1 1..354 CDD:224129 81/449 (18%)
M1P_guanylylT_B_like_N 1..232 CDD:133047 52/269 (19%)
LbetaH 260..339 CDD:294107 20/94 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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