DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2Bepsilon and eif-2Bgamma

DIOPT Version :9

Sequence 1:NP_569961.2 Gene:eIF2Bepsilon / 31156 FlyBaseID:FBgn0023512 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_495428.1 Gene:eif-2Bgamma / 174138 WormBaseID:WBGene00004090 Length:404 Species:Caenorhabditis elegans


Alignment Length:458 Identity:98/458 - (21%)
Similarity:181/458 - (39%) Gaps:99/458 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VQAVLIADNNVWNFKPLSDEGSTALLPLVNVRMLDYALMALNRSGVEEVFVYTSLYRSSIREHIR 73
            :|.:|:..........|:......|||:|.|.|..|.|.:|.|:|:.::.::       :||.::
 Worm     4 MQGILLCSGGGTRMPVLTRHVQKCLLPVVGVPMFLYPLSSLLRTGITDIKIF-------VREVLQ 61

  Fly    74 AGIATDAAWS---FKMTVHV----IGGEGCRCFGDAMRDLDNKALIRGHFILLGADTVTNADLRP 131
            ..:..:...|   .|...|:    :..|.   ||.|....::.:.|....:::..|.:::|.|.|
 Worm    62 LTLEKEVKKSKLLEKYPAHIEYICVNQED---FGTADLLKNHHSKITKDALIVSCDFISDASLIP 123

  Fly   132 VLEQHKRQAKFDKGTAATLV---FKECANNVRTGN--------EVLIAVDRRNDRLHYHQRLRMH 185
            :::       |.:.|.:|||   ...|.|....|:        :|:..|:...       :|...
 Worm   124 LVD-------FFRATNSTLVALIADTCVNAPAPGSKSKKPKATDVMAIVESTG-------QLAFL 174

  Fly   186 HKENRYQLP------LDVFLG-------NSC--VALHHNLLDPQIAIGSPSMLSLFNDNFDFQTR 235
            ..::.:..|      |.:|..       |.|  .|:.|.:|   :.:.....:|.|        :
 Worm   175 CGDDDFDAPLVMEKSLKIFPSIKLTSKYNDCHVYAIRHKVL---LNLSKSKHISSF--------K 228

  Fly   236 DDFVRGLLINEEL---LDSRIYVALLPAAQ---YAHKVNNWPAYQLVSRDIINRWAYPFVPDIGL 294
            .||| .|||:::.   .|.:.:...||...   .|| .|...:|..|::.|...           
 Worm   229 ADFV-PLLIDKQFEPDSDIKCFAYRLPHENGFVTAH-ANTLGSYFEVNKAIQKS----------- 280

  Fly   295 YKLQQEYVFHKDNI-YKSPE--AHVSKVALLQNVVIEAGSHVDSGSVISDSVIGANCRIGKNCRL 356
            :....||..:..|. ||:.:  ||.|:        ||..:.:|..|||..|.|..|||||:..:|
 Worm   281 FTRLMEYRGNGKNFNYKTDKIAAHESR--------IEESAEIDKDSVIKRSFISDNCRIGEKTKL 337

  Fly   357 TNAFLMADVTVMDNCRLEHCVVGEGAIINEDCDVSAGCVLGAKSVLPAKKTLAKTLITRTPSRRR 421
            ..:.:...|.:.:...:.:.::.:|..|.|:.||: .|::.....:|||..:...::........
 Worm   338 KESIIAKGVVIGNGASISNSIICDGVEIGENADVT-NCIVAKDQKVPAKGKVQNEVVEDGEDEEW 401

  Fly   422 SDD 424
            :||
 Worm   402 TDD 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2BepsilonNP_569961.2 eIF-2B_epsilon_N 9..223 CDD:133040 47/246 (19%)
GCD1 22..409 CDD:224129 94/428 (22%)
LbetaH 326..397 CDD:294107 21/70 (30%)
W2_eIF2B_epsilon 499..659 CDD:211396
eif-2BgammaNP_495428.1 GCD1 3..388 CDD:224129 96/440 (22%)
eIF-2B_gamma_N 4..215 CDD:133041 46/234 (20%)
LbH_G1P_AT_C_like 307..384 CDD:100046 21/85 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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