DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2Bepsilon and Eif2b3

DIOPT Version :9

Sequence 1:NP_569961.2 Gene:eIF2Bepsilon / 31156 FlyBaseID:FBgn0023512 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_598293.2 Gene:Eif2b3 / 171145 RGDID:620821 Length:452 Species:Rattus norvegicus


Alignment Length:490 Identity:102/490 - (20%)
Similarity:184/490 - (37%) Gaps:120/490 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QAVLIADNNVWNFKPLSDEGSTALLPLVNVRMLDYALMALNRSGVEEVFVYTSLYRSSIREHIRA 74
            |||::|.........|:......|||:.|..::.|.|..|.|.|.|||.|.|:       :.::.
  Rat     4 QAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTT-------KDVQK 61

  Fly    75 GIATDAAWSFKMTVHVIGGEGCRCFGDAMRDLDNKALIRGHFILLGADTVTNADLRPVLE----- 134
            .:..:.....|..:..|..|......|::|.:..|  ::...::||.|.:|:..|..|::     
  Rat    62 ALCAEFKMKLKPDIVCIPDEADMGTADSLRHIYPK--LKTDVLVLGCDLITDVALHEVVDLFRAY 124

  Fly   135 -------QHKRQAKFD-----KG---------------TAATLVFKECANNVRTGNEVLI--AVD 170
                   ..|.|...:     ||               |...|:|  .||......|::|  ::.
  Rat   125 DASLAMLMRKGQESTEPVPGQKGKKKTVEQRDFIGVDSTGKRLLF--MANEADLDEELVIKGSIL 187

  Fly   171 RRNDRLHYHQRLRMHHKENRYQLPLDVFLGNSCVALHHNLLDPQIAIGSPSMLSLFNDNFDFQTR 235
            :::.|:|:...|...|.....:..:|..:.|..:....:.|.|.:      :...|:.....|.:
  Rat   188 QKHPRIHFQTGLVDAHLYCLKKYVVDFLMENKSITSIRSELIPYL------VRKQFSSASSQQRQ 246

  Fly   236 DDFVRGLLINEELL----------------DSRIYVALLPAAQYAHKVNNWPAYQLVSRDIINRW 284
            :|       .||.|                |:.:.:|...|...|.:.:.|   :.:||..:..:
  Rat   247 ED-------KEEDLKKKEPKSLDIYSFIKKDNTLTLAPYDACWNAFRRDKW---EDLSRSQVRCY 301

  Fly   285 AYPF-------VPDIGLY--------KL-----QQEYVFHKDNIYKSPEAHVSKVALL-QNVVIE 328
            .:..       |..:|||        ||     .:|.:.|       |.|.::...|: .:.:|.
  Rat   302 VHIMKEGLCSRVSTLGLYMEANRQVPKLLSVLCPEESMIH-------PSAQIANKHLIGADSLIG 359

  Fly   329 AGSHVDSGSVISDSVIGANCRIGKNCRLTNAFLMADVTVMDNCRLEHCVVGEGAIINEDCDVSAG 393
            :.:.|...|.|..||||::|.|.....:||..||..|||.:...:...|:...|::....:: ..
  Rat   360 SDTQVGEKSSIKRSVIGSSCVIRDRVTVTNCLLMNSVTVEEGSSIHGSVICNNAVVEAGAEI-RD 423

  Fly   394 CVLGAKSVLPAKKTLAKTLITRTPSRRRSDDEVVV 428
            |::|:...:.||   ||.:           :||:|
  Rat   424 CLIGSGQRIEAK---AKRM-----------NEVIV 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2BepsilonNP_569961.2 eIF-2B_epsilon_N 9..223 CDD:133040 50/246 (20%)
GCD1 22..409 CDD:224129 93/457 (20%)
LbetaH 326..397 CDD:294107 20/70 (29%)
W2_eIF2B_epsilon 499..659 CDD:211396
Eif2b3NP_598293.2 eIF-2B_gamma_N 3..212 CDD:133041 46/218 (21%)
GCD1 4..447 CDD:224129 102/490 (21%)
LbH_eIF2B_gamma_C 357..437 CDD:100057 23/83 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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