| Sequence 1: | NP_569960.2 | Gene: | Rbcn-3B / 31155 | FlyBaseID: | FBgn0023510 | Length: | 1525 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_564219.1 | Gene: | AT1G24530 / 839068 | AraportID: | AT1G24530 | Length: | 418 | Species: | Arabidopsis thaliana |
| Alignment Length: | 214 | Identity: | 49/214 - (22%) |
|---|---|---|---|
| Similarity: | 73/214 - (34%) | Gaps: | 76/214 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 VSTNLVV-------PVVLWG-PTAPTH------------CISSVFLSDDQFTLVTGCYDGQICLW 46
Fly 47 QVEPTTLKMSPRCLLVGHSAPVLCLVRASLLPENNFLVSSSENGEMCTWDLTDGKCMEAVKLPQV 111
Fly 112 HTQIQSYHTANSEDVRLFCIGYYAEIMVMDPFSLEVIYVLSSKVKPDWISAIHVLRPMRRK--DD 174
Fly 175 VVLAITTT--GTVKVWTLT 191 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rbcn-3B | NP_569960.2 | WD40 repeat | 20..63 | CDD:293791 | 13/54 (24%) |
| WD40 | <22..202 | CDD:475233 | 41/174 (24%) | ||
| WD40 repeat | 68..107 | CDD:293791 | 7/38 (18%) | ||
| WD40 repeat | 118..152 | CDD:293791 | 3/33 (9%) | ||
| WD40 repeat | 160..204 | CDD:293791 | 12/36 (33%) | ||
| WD40 repeat | 212..251 | CDD:293791 | |||
| WD40 repeat | 406..459 | CDD:293791 | |||
| WD40 | 453..>597 | CDD:475233 | |||
| WD40 repeat | 513..555 | CDD:293791 | |||
| WD40 repeat | 560..596 | CDD:293791 | |||
| GvpP | <735..816 | CDD:444004 | |||
| WD40 | <1408..>1469 | CDD:441893 | |||
| WD40 repeat | 1439..1466 | CDD:293791 | |||
| AT1G24530 | NP_564219.1 | WD40 | <79..404 | CDD:441893 | 49/212 (23%) |
| WD40 repeat | 86..124 | CDD:293791 | |||
| WD40 repeat | 198..233 | CDD:293791 | |||
| WD40 repeat | 239..278 | CDD:293791 | 8/34 (24%) | ||
| WD40 repeat | 283..323 | CDD:293791 | 12/39 (31%) | ||
| WD40 repeat | 330..366 | CDD:293791 | 10/82 (12%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||