Protein Alignment Rbcn-3B and AT3G51930

DIOPT Version :10

• Sequence 1: NP_569960.2
• Gene: Rbcn-3B / 31155
• FlyBaseID: FBgn0023510
• Length: 1525
• Species: Drosophila melanogaster
• Sequence 2: NP_190761.1
• Gene: AT3G51930 / 824356
• AraportID: AT3G51930
• Length: 415
• Species: Arabidopsis thaliana
• Alignment Length: 396
• Identity: 72/396 - (18%)
• Similarity: 114/396 - (28%)
• Gaps: 185/396 - (46%)

  Fly    36 TGCYDGQICLWQVE--------------PTT-------LKMS--------PRCLLVGHSAPVLCL 71
            |...|.:|.:|:|.              |||       :|.|        .:.|.:.|:..:.||
plant   116 TAHQDSRIRVWKVSRRNSENAFRLVDTLPTTKDYLGKFMKQSNYVQTRRNHKRLWIEHADSISCL 180

  Fly    72 -VRASLLPENNFLVSSSENGEMCTWDLTDGKCMEAVKLPQVHTQIQSYHTANSEDVRLFCIGYYA 135
             |.|.:      :.|.|.:..:..|.|:|.||:|::|             |:.:.:.....|
plant   181 AVHAGI------IYSGSWDKTLKVWRLSDLKCLESIK-------------AHDDAINGLVAG--- 223

  Fly   136 EIMVMDPFSLEVIYVLSSKVKPDWISAIHVLRPMRRKDDVVLAITTTGTVKVWTLTGNENKHAEP 200
                                                 |..|.:.:..|.||:|   |.|.:....
plant   224 -------------------------------------DGRVYSASADGKVKIW---GKEKRKQIE 248

  Fly   201 IYENESKEIRCLNAITMNCCAQNQRTVLLVCTKYWQIYDA---------------GDF------- 243
            ...:.|..:..|.|........:..:|::.....| :|..               |||
plant   249 STSSSSSSLHVLKATLEGRAEVSVNSVVVSGDGNW-VYGGGSDGFVIGWEKKEKEGDFEEWRLGF 312

  Fly   244 -------TVLCSVIAPARERWQGGDFITS---DR-VMLWTDEGKGYLYKL--------PANCI-- 287
                   .|||..:.        |:.:.|   |: :.||..|..|.|.|.        |..|:
plant   313 ETRGHNMAVLCMCVV--------GEMVCSGSADKSIGLWRREVTGMLCKFGVIHGHEGPVKCLQA 369

  Fly   288 -PDNKEFHSKSVVRDAPYLYYVLQHAGDKVLSCPPAMKLLQGAGGQHNLLRGDSEGYISVWNVPE 351
             |:|.         .|.::.|                     :||....||        ||.||:
plant   370 SPNNV---------GAGFMLY---------------------SGGLDKSLR--------VWWVPK 396

  Fly   352 VPLDNI 357
              .||:
plant   397 --QDNL 400

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbcn-3B	NP_569960.2	WD40 repeat	20..63	CDD:293791	11/55 (20%)
		WD40	<22..202	CDD:475233	35/195 (18%)
		WD40 repeat	68..107	CDD:293791	12/39 (31%)
		WD40 repeat	118..152	CDD:293791	2/33 (6%)
		WD40 repeat	160..204	CDD:293791	8/43 (19%)
		WD40 repeat	212..251	CDD:293791	11/67 (16%)
		WD40 repeat	406..459	CDD:293791
		WD40	453..>597	CDD:475233
		WD40 repeat	513..555	CDD:293791
		WD40 repeat	560..596	CDD:293791
		GvpP	<735..816	CDD:444004
		WD40	<1408..>1469	CDD:441893
		WD40 repeat	1439..1466	CDD:293791
AT3G51930	NP_190761.1	WD40	53..392	CDD:475233	66/384 (17%)
		WD40 repeat	105..145	CDD:293791	5/28 (18%)
		WD40 repeat	178..211	CDD:293791	12/38 (32%)
		WD40 repeat	217..265	CDD:293791	12/90 (13%)
		WD40 repeat	272..314	CDD:293791	6/42 (14%)
		WD40 repeat	321..343	CDD:293791	6/29 (21%)