DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbcn-3B and DCAF10

DIOPT Version :10

Sequence 1:NP_569960.2 Gene:Rbcn-3B / 31155 FlyBaseID:FBgn0023510 Length:1525 Species:Drosophila melanogaster
Sequence 2:NP_077321.3 Gene:DCAF10 / 79269 HGNCID:23686 Length:559 Species:Homo sapiens


Alignment Length:379 Identity:79/379 - (20%)
Similarity:133/379 - (35%) Gaps:125/379 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VVLWGPTAPTH----------CISSVFLSDDQFTLVTGCYDG-QICLWQVEPTTLKMSPRCLLVG 63
            |:|:.|.:..|          |::::...|::  |...|.|. .|.||.:.....|:   |.|.|
Human   192 VLLFDPISSKHIKTLSEAHEDCVNNIRFLDNR--LFATCSDDTTIALWDLRKLNTKV---CTLHG 251

  Fly    64 HSAPVLCLVRASLLPENN--FLVSSSENGEMCTWD---LTDGKCMEAVKLPQVHTQIQSYHTANS 123
            |::.|     .::..:.|  .||:|..:|.:..||   .|:..|        .|.:.  :||...
Human   252 HTSWV-----KNIEYDTNTRLLVTSGFDGNVIIWDTNRYTEDGC--------PHKKF--FHTRFL 301

  Fly   124 EDVRLF--C--------IGYYAEIMVMD-PFSLEVIYVLSSKVKPDWISAIHVLRPMR--RKDDV 175
            ..:||.  |        .||...:..:| ..||||             .:..:||..|  ...|:
Human   302 MRMRLTPDCSKMLISTSSGYLLILHDLDLTKSLEV-------------GSYPILRARRTTSSSDL 353

  Fly   176 VLAITTTGTVKVWTLTG---------NENKHAEPIYENESKEIR-CLNAITMNCCAQNQRTVLLV 230
            ..:.:::|.    .::|         :..||.....:.|....| .|..:|.....::...   .
Human   354 TTSSSSSGP----RVSGSPCHHSDSNSSEKHMSRASQREGVSPRNSLEVVTPEVLGESDHG---N 411

  Fly   231 CTKYWQIYDAGDFTVL----------CSVI------APARERWQGGDFITSDRVML----WTDE- 274
            |....|::..|..|:|          |:.:      ||.|.        .|.|..|    :.:| 
Human   412 CITSLQLHPKGWATLLRCSSNSDDEECTCVYEFQEGAPVRP--------VSPRCSLRLTHYIEEA 468

  Fly   275 --GKGYLYKLPANCI-PDNKEFHSKSVVRDAPYLYYVLQHAGDK----VLSCPP 321
              |:||:.:|   |. ||.:...|       |:.|.:.....||    ::.|.|
Human   469 NVGRGYIKEL---CFSPDGRMISS-------PHGYGIRLLGFDKQCSELVDCLP 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbcn-3BNP_569960.2 WD40 repeat 20..63 CDD:293791 12/53 (23%)
WD40 <22..202 CDD:475233 43/207 (21%)
WD40 repeat 68..107 CDD:293791 10/43 (23%)
WD40 repeat 118..152 CDD:293791 12/44 (27%)
WD40 repeat 160..204 CDD:293791 8/54 (15%)
WD40 repeat 212..251 CDD:293791 8/54 (15%)
WD40 repeat 406..459 CDD:293791
WD40 453..>597 CDD:475233
WD40 repeat 513..555 CDD:293791
WD40 repeat 560..596 CDD:293791
GvpP <735..816 CDD:444004
WD40 <1408..>1469 CDD:441893
WD40 repeat 1439..1466 CDD:293791
DCAF10NP_077321.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..119
WD 1 166..205 4/12 (33%)
WD40 <168..>334 CDD:441893 36/161 (22%)
WD40 repeat 172..207 CDD:293791 4/14 (29%)
WD 2 209..247 9/42 (21%)
WD40 repeat 214..250 CDD:293791 9/40 (23%)
WD 3 251..290 11/43 (26%)
WD40 repeat 256..282 CDD:293791 7/30 (23%)
WD 4 296..335 9/38 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..396 7/49 (14%)
WD 5 408..448 6/42 (14%)
WD 6 470..508 12/47 (26%)
WD40 517..555 CDD:197651
WD 7 526..559
Blue background indicates that the domain is not in the aligned region.

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