Sequence 1: | NP_001284797.1 | Gene: | Rbcn-3B / 31155 | FlyBaseID: | FBgn0023510 | Length: | 1525 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001020546.1 | Gene: | Wdr61 / 66317 | MGIID: | 1917493 | Length: | 305 | Species: | Mus musculus |
Alignment Length: | 286 | Identity: | 62/286 - (21%) |
---|---|---|---|
Similarity: | 101/286 - (35%) | Gaps: | 60/286 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 336 LRGDSEGYISVWNVPEVPLDNISILQAKQMPPRPLKPHVCTSLVEAWSIMDPPPVGILDQLSRIT 400
Fly 401 ESPVKLTSSIYLPQQSRLVIGREDGSIVIVPATQTVMMQLLVGIKQNFSDWPSHQILYGHRGRVN 465
Fly 466 CLLCPSMIHSRYEKSHLLSGGIDFAVCLWDLYSGSLLHRFCVHAGEITQLLVPPESCSPRILKCI 530
Fly 531 CSVASDHSVTLVSLQERKCVTLASRHLFPVVTIKWRPLDDFLIVGCSDGSVYVWQMET------- 588
Fly 589 -GHLDR---VLHGMLAEEVLSACDEQ 610 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rbcn-3B | NP_001284797.1 | WD40 | <11..>204 | CDD:225201 | |
WD40 repeat | 20..63 | CDD:293791 | |||
WD40 | <22..202 | CDD:295369 | |||
WD40 repeat | 68..107 | CDD:293791 | |||
WD40 repeat | 118..152 | CDD:293791 | |||
WD40 repeat | 160..204 | CDD:293791 | |||
WD40 repeat | 212..251 | CDD:293791 | |||
WD40 repeat | 406..459 | CDD:293791 | 10/52 (19%) | ||
WD40 | <449..>607 | CDD:225201 | 39/168 (23%) | ||
WD40 | 453..>597 | CDD:295369 | 37/154 (24%) | ||
WD40 repeat | 513..555 | CDD:293791 | 5/41 (12%) | ||
WD40 repeat | 560..596 | CDD:293791 | 13/46 (28%) | ||
WD40 | <1395..>1469 | CDD:225201 | |||
WD40 | <1399..1495 | CDD:295369 | |||
WD40 repeat | 1439..1466 | CDD:293791 | |||
Wdr61 | NP_001020546.1 | WD40 | 13..302 | CDD:238121 | 62/286 (22%) |
WD 1 | 14..57 | ||||
WD40 repeat | 19..62 | CDD:293791 | 1/1 (100%) | ||
WD 2 | 62..101 | 10/59 (17%) | |||
WD40 repeat | 68..105 | CDD:293791 | 9/57 (16%) | ||
WD 3 | 104..143 | 9/46 (20%) | |||
WD40 repeat | 110..146 | CDD:293791 | 7/43 (16%) | ||
WD 4 | 146..187 | 14/54 (26%) | |||
WD40 repeat | 152..188 | CDD:293791 | 13/49 (27%) | ||
WD 5 | 188..227 | 8/44 (18%) | |||
WD40 repeat | 193..229 | CDD:293791 | 6/41 (15%) | ||
WD 6 | 230..269 | 11/38 (29%) | |||
WD40 repeat | 236..271 | CDD:293791 | 9/34 (26%) | ||
WD 7 | 272..305 | 6/25 (24%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4155 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |