Sequence 1: | NP_001284797.1 | Gene: | Rbcn-3B / 31155 | FlyBaseID: | FBgn0023510 | Length: | 1525 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_651635.2 | Gene: | CG1523 / 43400 | FlyBaseID: | FBgn0039601 | Length: | 621 | Species: | Drosophila melanogaster |
Alignment Length: | 651 | Identity: | 128/651 - (19%) |
---|---|---|---|
Similarity: | 198/651 - (30%) | Gaps: | 202/651 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 PTAPTHCISSVFLSDDQFTLVTGCYDGQICLWQVEPTTLKMSPRCLLVGHSAPVLCLVRASLLPE 79
Fly 80 NNFLVSSSENGEMCTWDLTDGKCMEAVKLPQVHTQ-IQSYHTANSEDVRLFCI--GYYAEIMVMD 141
Fly 142 PFSLEVIY--------------VLSSKVKPDWISAIHVLRPMRRKDDVVLAITTTGTVKVWTLTG 192
Fly 193 NENKHAEPIYENESKEIRCLNAITMNCCAQNQRTVLLVCTKYWQ-IYDAGDFTVLC----SVIAP 252
Fly 253 ARERWQGGDFITSDRVMLWTDEGKGYLYKLPANCIPDNKEFHSKSVVRDAPYLYYVLQHAGDKVL 317
Fly 318 SCPPAMKLLQGAGGQHN---LLRGDS-----------------------------EGYISVWNVP 350
Fly 351 E--VPLDNI--SILQAKQMPPRPLKPHVCTSLVEAWSIMDPPPVGILDQLSRITESPVKLTSSIY 411
Fly 412 LPQQS----RLVIG-----------------REDGSIVIVPATQTVMMQLLVGIKQNFSDWPSHQ 455
Fly 456 ILYGHRGRVNCLLCPSMIHSRYEKSHLLSGGIDFAVCLWDLYSGSLLHRFCVHAGEITQLLVPPE 520
Fly 521 SCSPRILKCICSVASDHSVTLVSLQERKCVTLA--SRHLFPVVTIKWRPLDDFLIVGCSDGSVYV 583
Fly 584 W 584 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rbcn-3B | NP_001284797.1 | WD40 | <11..>204 | CDD:225201 | 44/205 (21%) |
WD40 repeat | 20..63 | CDD:293791 | 8/42 (19%) | ||
WD40 | <22..202 | CDD:295369 | 40/196 (20%) | ||
WD40 repeat | 68..107 | CDD:293791 | 10/38 (26%) | ||
WD40 repeat | 118..152 | CDD:293791 | 7/49 (14%) | ||
WD40 repeat | 160..204 | CDD:293791 | 10/43 (23%) | ||
WD40 repeat | 212..251 | CDD:293791 | 9/43 (21%) | ||
WD40 repeat | 406..459 | CDD:293791 | 14/73 (19%) | ||
WD40 | <449..>607 | CDD:225201 | 30/138 (22%) | ||
WD40 | 453..>597 | CDD:295369 | 29/134 (22%) | ||
WD40 repeat | 513..555 | CDD:293791 | 9/43 (21%) | ||
WD40 repeat | 560..596 | CDD:293791 | 9/25 (36%) | ||
WD40 | <1395..>1469 | CDD:225201 | |||
WD40 | <1399..1495 | CDD:295369 | |||
WD40 repeat | 1439..1466 | CDD:293791 | |||
CG1523 | NP_651635.2 | WD40 | 43..235 | CDD:295369 | 33/157 (21%) |
WD40 | <45..>218 | CDD:225201 | 32/140 (23%) | ||
WD40 repeat | 51..87 | CDD:293791 | 128/651 (20%) | ||
WD40 repeat | 95..129 | CDD:293791 | 7/37 (19%) | ||
WD40 repeat | 136..174 | CDD:293791 | 10/40 (25%) | ||
WD40 repeat | 181..210 | CDD:293791 | 6/31 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4155 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |