| Sequence 1: | NP_001284797.1 | Gene: | Rbcn-3B / 31155 | FlyBaseID: | FBgn0023510 | Length: | 1525 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001261799.1 | Gene: | Poc1 / 39502 | FlyBaseID: | FBgn0036354 | Length: | 403 | Species: | Drosophila melanogaster |
| Alignment Length: | 394 | Identity: | 76/394 - (19%) |
|---|---|---|---|
| Similarity: | 130/394 - (32%) | Gaps: | 120/394 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 500 SLLHRFCVHAGEITQLLVPPESCSPRILKCICSVASDHSVTLVSL-QERKCVTLASRHLFPVVTI 563
Fly 564 KWRPLDDFLIVGCSDGSVYVWQME----------------------TGHLDRVLHGMLAEEVLSA 606
Fly 607 CDE------------------QAEDGGSGGGGGSNG---ASASEMGMANPAVHFF---RGLKSRN 647
Fly 648 MNAIRHATQRGITQLQQLQGHNQGNFDFLMKHRSNPLVIQGLRTNPKDAESHILFFDIEG-LIFE 711
Fly 712 LHSEEYAQMTPATLESLGVHLQNPKDGKSM----------------HLDASKKI-----GDFFNK 755
Fly 756 VKNKAVDVEKILKDKDKHGL-VQKFKEKTEIVEKKVQAK-VESLQKAVEPHEEQQDLKSKIASKM 818
Fly 819 EVTH 822 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rbcn-3B | NP_001284797.1 | WD40 | <11..>204 | CDD:225201 | |
| WD40 repeat | 20..63 | CDD:293791 | |||
| WD40 | <22..202 | CDD:295369 | |||
| WD40 repeat | 68..107 | CDD:293791 | |||
| WD40 repeat | 118..152 | CDD:293791 | |||
| WD40 repeat | 160..204 | CDD:293791 | |||
| WD40 repeat | 212..251 | CDD:293791 | |||
| WD40 repeat | 406..459 | CDD:293791 | |||
| WD40 | <449..>607 | CDD:225201 | 31/129 (24%) | ||
| WD40 | 453..>597 | CDD:295369 | 30/119 (25%) | ||
| WD40 repeat | 513..555 | CDD:293791 | 12/42 (29%) | ||
| WD40 repeat | 560..596 | CDD:293791 | 10/57 (18%) | ||
| WD40 | <1395..>1469 | CDD:225201 | |||
| WD40 | <1399..1495 | CDD:295369 | |||
| WD40 repeat | 1439..1466 | CDD:293791 | |||
| Poc1 | NP_001261799.1 | WD40 | 10..298 | CDD:238121 | 67/336 (20%) |
| WD40 | 14..388 | CDD:225201 | 75/389 (19%) | ||
| WD40 repeat | 22..58 | CDD:293791 | 11/41 (27%) | ||
| WD40 repeat | 63..99 | CDD:293791 | 6/35 (17%) | ||
| WD40 repeat | 106..140 | CDD:293791 | 7/44 (16%) | ||
| WD40 repeat | 147..183 | CDD:293791 | 8/39 (21%) | ||
| WD40 repeat | 189..224 | CDD:293791 | 11/58 (19%) | ||
| WD40 repeat | 231..254 | CDD:293791 | 3/22 (14%) | ||
| WD40 repeat | 273..297 | CDD:293791 | 4/26 (15%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C45442349 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.930 | |||||