Protein Alignment Rbcn-3B and LOC3292129

DIOPT Version :10

• Sequence 1: NP_569960.2
• Gene: Rbcn-3B / 31155
• FlyBaseID: FBgn0023510
• Length: 1525
• Species: Drosophila melanogaster
• Sequence 2: XP_554046.4
• Gene: LOC3292129 / 3292129
• VectorBaseID: AGAMI1_012873
• Length: 1190
• Species: Anopheles gambiae
• Alignment Length: 1278
• Identity: 218/1278 - (17%)
• Similarity: 391/1278 - (30%)
• Gaps: 457/1278 - (35%)

  Fly    70 CLVRASLLPENNFLVSSS---------------ENGEMCTWDLTDGKCMEA----VKLPQVHTQI 115
            ||.:..|:..:.|..|.:               |...:..|||..|:.:..    ...|:..|..
Mosquito    48 CLPKTQLINVHGFTKSLACSPDWSAKRLFATLDEYNVLYVWDLDLGQPVHGHRGHATAPKAPTSR 112

  Fly   116 QSYHTANSEDVRLFCIGYYAEIMVMDPFSLEVIYVL---SSKVKPDWI--SAIHVLRPMRRKDDV 175
            |.:....|    ..|...:.:::..|...| |:|.|   |.|..||:.  ..:..|.|.....||
Mosquito   113 QQFKDVTS----AICFSAHGKVISCDRSDL-VVYCLLADSYKAMPDFFRNKTVVTLVPSPVDRDV 172

  Fly   176 VLAITTTGTVKVWTLTGNENKHAEPIYENESKEIRCLNAITM----------------------- 217
            .:|....|.::::::......|....::.|...|.|:....:
Mosquito   173 FIAGLKDGLIQIFSIKKMAILHTLRSHDKEIVSIECMTVPVLKGNVWRKRQNNPEAGSGNVPDSA 237

  Fly   218 NCCAQN-------QRTVLLV-CTKYWQIYDAGD-------------------------------- 242
            :...||       ::||.:. .:.::.|||..:
Mosquito   238 SKTVQNRPKKQARKKTVPVADDSDFFDIYDFNESQEEFGTIIDREAKDDKQNQFREKAKTVEGFN 302

  Fly   243 FTVLC-----SVIAPARERW--------QGG--------DFITSD----------RVMLWTDEGK 276
            |...|     .::..|..|.        :.|        ||.|.|          |..:..|...
Mosquito   303 FLEACENLKEDILKAANRREEEEEEEDDEAGEQSTLAQEDFNTDDENDLDDCEKLRDYVVVDNED 367

  Fly   277 GYLYKLPANCIPDNKEFHSKSVVRDAPYLYYVLQHAGDKVLSCPPAMKLLQGAGGQHNLLRGDSE 341
            ....:.|   :.|.:||.||.:                                    |:.|..|
Mosquito   368 REAEEEP---LDDREEFESKLI------------------------------------LVSGSRE 393

  Fly   342 GYISVWNVPE-VPLDNISILQAKQMPPRPLKPHVCTSLVEAWSIMDPPPVGILDQLSRITESPVK 405
            ..:..|:... :|:|.|.|       |......:|.:|
Mosquito   394 NVVWFWDYETGLPIDKIVI-------PSETNGRLCDTL--------------------------- 424

  Fly   406 LTSSIYLPQQSRLVIGREDGSIV---IVPATQTVMMQLLVGIKQNFSDWPSHQILYGHR------ 461
            .|::::: .:|.:|....:|.::   :....:...:||:.  |::.:.:|..:|.:..|
Mosquito   425 FTNAVWM-DESHIVANTPNGQVIEWKVEFKFKNDRLQLVA--KESLAPYPVEKIFHVIRAKGLTK 486

  Fly   462 ----GRVNCLLCPSMIHSRYEKSHLLSGG-----IDFAVCLWDLYSGSLLHRFCVHAGEITQLLV 517
                ||.  |.| |.||.:.....:...|     :|:: |:      :..:| ||....:..:::
Mosquito   487 METNGRY--LWC-SSIHRKISCLEVAESGKATVVVDYS-CI------TPTNR-CVVENPLESMVI 540

  Fly   518 PPESCSPRILKCICSVASDHSVTLVSLQERKCVTLASRHLFP-----------VVTIKWRP-LDD 570
            ...|.:|||.|          :.|.|||...         .|           |:.:.|.| .:|
Mosquito   541 ALASAAPRIEK----------LNLASLQPDN---------IPFKPFTNKISGFVMFLAWHPEEED 586

  Fly   571 FLIVGCSDGSVYVWQMETGHLDRV--------------LHGMLAEE-------VLSACDEQAEDG 614
            .|....::|.|.|  ::|..:..|              ||......       ||.||
Mosquito   587 KLAFATNEGRVGV--LDTSSMSNVPVIMKPFINKEVYALHWCFLTNDKQERRLVLFAC------- 642

  Fly   615 GSGGGGGSNGASASEMGMANPAVHFFRGLKSRNMNAIRH----------ATQRG---IT----QL 662
                  |:|..:...|..|    |.:..::.:....:.:          .||:|   ||    .|
Mosquito   643 ------GTNELAYYHMSGA----HKYEPVRCKQFGQVSNISGTDKMCFIGTQQGSIYITGLDENL 697

  Fly   663 QQLQGHNQGN-FDFLMKHRSNPLVI----QGLR-TNPKDA-----ESHILFFD--IEGL------ 708
            :||..|...| :...::::.|.|.:    ..:| .|..|.     |:.|:..:  .||:
Mosquito   698 KQLYCHKVANRYISSVEYKQNYLAVGSNDHAIRLINLSDGFDGEQENEIITLEGHTEGICKVKWN 762

  Fly   709 ----------------------------IFELHSEEYAQMTPATLESL------GVHLQNPKDGK 739
                                        :|...|..|..:.....|::      |:.|.: .|..
Mosquito   763 LGDSMLLLSSSYDCSIRIWDALSATCLSVFYTKSFAYGAIFSPLDENIILYVGKGIPLSS-YDYT 826

  Fly   740 SMHLDASKKIGDFFNKVKNKAVDVEKILKDK--DKHGLVQKFKEKTEIVE---------KKVQAK 793
            ..|....|.....:.|:|...::..|.::..  .|.|...|......:.|         |||..|
Mosquito   827 KQHDKVPKASSKKYPKIKFATLEDSKPIETMPGKKRGRGNKQPAAVSVNEAVDQLTDEVKKVTLK 891

  Fly   794 VESLQKAVEPHEEQQDLKSKIASKMEVTHVMEVAQLLLSLLHSWGLDPHLDKMCETRLGLLRPIV 858
            ..:   ||:|........:...:..|...|.:|.:.::.|||:...:|...|:.|...|.....:
Mosquito   892 EGA---AVKPMPTPTVATTLPLTYRETNKVKDVLECIVKLLHTPDPEPEPTKLDEDENGSDNESL 953

  Fly   859 PISYGVLSKAGYMSLLLPTWQNNYAIPPGIQLPSSSKKRPLPEELQRLEHLTAVFTSRLHWELST 923
            ...:..|.|...:....|.          ::.|.:..:...|:|       ...:..||   .||
Mosquito   954 DEEFNRLIKPKAIEQKQPV----------VEPPVNDSEMSAPDE-------KMFYNERL---FST 998

  Fly   924 TLTTNHILALVAMSNTLLSMSAASFLPDSEKHKKLQRLAQRTDSTLSNEEEREEL------MAHH 982
            ......::...|..:|:..:|:...:       .|.:|..:...|:.....:::|      :|.:
Mosquito   999 EQNLKQLIEEEAKMHTITDVSSIGMV-------MLPQLLHKLKDTILGCITKKKLTPQMLALAPY 1056

  Fly   983 ISQI-------KHAWSL------LATHHCFLLPDKI-----EALEPKKFKR-------------P 1016
            :|.:       .:|:.|      ||....||...|:     |..:.|.|:.             |
Mosquito  1057 VSHMFWRQCCQAYAYQLIEGQQPLAAVPYFLASHKVDSSIEELCDAKYFREAWVICRLQKMPDDP 1121

  Fly  1017 QVEMMVKRWQHH--CIEIREAAQQILLGELTRMGKKGRKQLVE 1057
            .:|.:..:|.||  .|...|||      .|...|.|..|:.:|
Mosquito  1122 ILEQVASKWAHHLDVIGNYEAA------ALVWTGVKKYKEAIE 1158

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbcn-3B	NP_569960.2	WD40 repeat	20..63	CDD:293791
		WD40	<22..202	CDD:475233	31/155 (20%)
		WD40 repeat	68..107	CDD:293791	10/55 (18%)
		WD40 repeat	118..152	CDD:293791	7/36 (19%)
		WD40 repeat	160..204	CDD:293791	7/45 (16%)
		WD40 repeat	212..251	CDD:293791	9/106 (8%)
		WD40 repeat	406..459	CDD:293791	9/55 (16%)
		WD40	453..>597	CDD:475233	36/184 (20%)
		WD40 repeat	513..555	CDD:293791	9/41 (22%)
		WD40 repeat	560..596	CDD:293791	10/50 (20%)
		GvpP	<735..816	CDD:444004	17/91 (19%)
		WD40	<1408..>1469	CDD:441893
		WD40 repeat	1439..1466	CDD:293791
LOC3292129	XP_554046.4	None