Sequence 1: | NP_001284797.1 | Gene: | Rbcn-3B / 31155 | FlyBaseID: | FBgn0023510 | Length: | 1525 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_877435.3 | Gene: | WDR72 / 256764 | HGNCID: | 26790 | Length: | 1102 | Species: | Homo sapiens |
Alignment Length: | 1166 | Identity: | 322/1166 - (27%) |
---|---|---|---|
Similarity: | 548/1166 - (46%) | Gaps: | 221/1166 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 VVLWGPTAPTHCISSVFLSDDQFTLVTGCYDGQICLWQVEPTTLKMSPRCLLVGHSAPVLCLVRA 74
Fly 75 SLLPENNFLVSSSENGEMCTWDLTDGKCMEAVKLPQVHTQIQSYHTA--NSEDVRLFCIGYYAEI 137
Fly 138 MVMDPFSLEVIYVLSSKVKPDWISAIHVLRPMRRKDDVVLAITTTGTVKVWTLTGNEN--KHAEP 200
Fly 201 IYENESKEIRCLNAITMNCCAQNQRTVLLVCTKYWQIYDAGDFTVLCSVIAPARERWQGGDFITS 265
Fly 266 DRVMLWTDEGKGYLYKL----------PAN-------------C---IPDNKEFHSKSVVRDAPY 304
Fly 305 LYYVLQHAGDKVLSCPPAMKLLQGAGGQHNLLRGDSEGYISVWNVPEVPLDNISILQAKQMPPRP 369
Fly 370 LKPHVCTSLVEAWSIMDPPPVGILDQLSRITE--SPVKLTSSIYLPQQSRLVIGREDGSIVIVPA 432
Fly 433 TQTVMMQLLVG---IKQNFSDWPSHQILYGHRGRVNCLLCPSMIHSRYEKSHLLSGGIDFAVCLW 494
Fly 495 DLYSGSLLHRFCVHAGEITQLLVPPESCSPRILKCICSVASDHSVTLVSLQERKCVTLASRHLFP 559
Fly 560 VVTIKWRPLDDFLIVGCSDGSVYVWQMETGHLDRVLHGMLAEEVLSACDEQAEDGGSGGGGGSNG 624
Fly 625 ASASEMGMANPAVHFFRGLKSRNMNAIRHATQRGITQLQQLQGHNQGNFDFLMKHRSNPLVIQGL 689
Fly 690 RTNPKDAESHILFFDIEGLIFELHSEEYAQMTPATLESLGVHLQNPKDGKSMHLDASKKI--GDF 752
Fly 753 FNKVKNKAVDVEK----ILKDKDKHG--------------LVQ-----KFKEKTEIVEKKVQAKV 794
Fly 795 ESLQKAVEPHEEQQDLKSKIASKMEVTHVMEVAQLLLSLLHSWGLDPHLDKMCETRLGLLRPIVP 859
Fly 860 ISYGVLSKAGYMSLLLPTWQ-------NNYAIPPGIQLPSSSKKRPLPEELQRLEHLTAVFTSRL 917
Fly 918 HWELSTTLTTNHILALVAMSNTLLSMSAASFLPDSEKHKKLQRLAQRTDSTLSNEEEREEL--MA 980
Fly 981 HHISQIKHAWSLLATHHCFLLPDKIEALEPKKFKRPQVEM----MVKRWQHHCIEIREAAQQILL 1041
Fly 1042 GELTR----------------MGKKGR---KQLVE--SWAQ---------YLPLYTHTEPI 1072 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rbcn-3B | NP_001284797.1 | WD40 | <11..>204 | CDD:225201 | 77/196 (39%) |
WD40 repeat | 20..63 | CDD:293791 | 19/42 (45%) | ||
WD40 | <22..202 | CDD:295369 | 70/183 (38%) | ||
WD40 repeat | 68..107 | CDD:293791 | 19/38 (50%) | ||
WD40 repeat | 118..152 | CDD:293791 | 9/35 (26%) | ||
WD40 repeat | 160..204 | CDD:293791 | 12/45 (27%) | ||
WD40 repeat | 212..251 | CDD:293791 | 14/38 (37%) | ||
WD40 repeat | 406..459 | CDD:293791 | 21/55 (38%) | ||
WD40 | <449..>607 | CDD:225201 | 70/157 (45%) | ||
WD40 | 453..>597 | CDD:295369 | 65/143 (45%) | ||
WD40 repeat | 513..555 | CDD:293791 | 17/41 (41%) | ||
WD40 repeat | 560..596 | CDD:293791 | 21/35 (60%) | ||
WD40 | <1395..>1469 | CDD:225201 | |||
WD40 | <1399..1495 | CDD:295369 | |||
WD40 repeat | 1439..1466 | CDD:293791 | |||
WDR72 | NP_877435.3 | WD40 | <14..296 | CDD:225201 | 103/282 (37%) |
WD 1 | 15..54 | 18/39 (46%) | |||
WD40 repeat | 20..60 | CDD:293791 | 18/40 (45%) | ||
WD 2 | 60..102 | 22/41 (54%) | |||
WD40 repeat | 66..107 | CDD:293791 | 19/40 (48%) | ||
WD40 repeat | 112..151 | CDD:293791 | 10/38 (26%) | ||
WD40 repeat | 160..206 | CDD:293791 | 12/45 (27%) | ||
WD 3 | 160..197 | 10/36 (28%) | |||
WD40 repeat | 213..259 | CDD:293791 | 14/45 (31%) | ||
WD40 repeat | 267..315 | CDD:293791 | 10/47 (21%) | ||
WD 4 | 318..362 | 13/65 (20%) | |||
WD40 repeat | 323..352 | CDD:293791 | 7/43 (16%) | ||
WD 5 | 402..441 | 13/38 (34%) | |||
WD40 | <404..>596 | CDD:225201 | 84/195 (43%) | ||
WD40 | 404..>595 | CDD:295369 | 84/194 (43%) | ||
WD40 repeat | 407..459 | CDD:293791 | 21/55 (38%) | ||
WD 6 | 459..504 | 17/44 (39%) | |||
WD40 repeat | 465..502 | CDD:293791 | 13/36 (36%) | ||
WD 7 | 507..552 | 18/44 (41%) | |||
WD40 repeat | 512..554 | CDD:293791 | 16/41 (39%) | ||
WD 8 | 555..594 | 24/38 (63%) | |||
WD40 repeat | 561..596 | CDD:293791 | 20/34 (59%) | ||
WD40 | 13..>191 | CDD:295369 | 72/178 (40%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D331603at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002541 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR44099 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.020 |