Sequence 1: | NP_001284797.1 | Gene: | Rbcn-3B / 31155 | FlyBaseID: | FBgn0023510 | Length: | 1525 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_033377.1 | Gene: | Tep1 / 21745 | MGIID: | 109573 | Length: | 2629 | Species: | Mus musculus |
Alignment Length: | 1176 | Identity: | 210/1176 - (17%) |
---|---|---|---|
Similarity: | 338/1176 - (28%) | Gaps: | 510/1176 - (43%) |
- Green bases have known domain annotations that are detailed below.
Fly 21 CISSVFLSD---DQFTLVTGCYDGQICLWQVEPTTLKMSPRCLLVGHSAPVLCLVRASLLPENNF 82
Fly 83 LVSSSENGEMCTWDLTDGKCMEAVKLPQVHTQIQSYHTANSEDVRLFCIGYYAEIMVMDPFSLEV 147
Fly 148 IYVLSSKVKPDW------ISAIHVLRPMRRKDDVVLAITT-TGTVKVWTLTGNENKHAEPIYENE 205
Fly 206 SKEIRCLNAITMNCCAQNQRTVLLVCT-KYWQIYD------AGDFT----VLCSVIAP-----AR 254
Fly 255 ERWQGG-DFITSD----------------------------------RVMLWTDEGKGYLYKLPA 284
Fly 285 NCIPDNKEFHSKSVVRDAPYLYYVLQHAGDKVLSCPPAMKLLQGAGGQHNLLRGDSEGYISVWN- 348
Fly 349 ---VPEVPLDNISILQAKQMPPRPLKPHVCTSLVEAWSIMDPPPVGILD------QLSRITESP- 403
Fly 404 -----VKLTSSIYLPQQSRLVIGREDGSI--------------VIVPATQTVM-----MQLLVGI 444
Fly 445 KQNFSD--WPS--------HQI-------LYGHRGRVNC------------------LLC----- 469
Fly 470 ---PSMIHSRYEKSH--------------LLSGGIDFAVCLWDLYSGSLLHRFCVHAGEITQLLV 517
Fly 518 --------------------------------PPESCS----PR--------------------- 525
Fly 526 ----ILKCICSVASDHS--VTLVSLQERKCVTLAS--------------------RHLFPVVTIK 564
Fly 565 WRPLDDFLIVGCSDGSVYVWQM-----------ETGHLDRVLHGMLAEEVLSACDEQAEDGGSGG 618
Fly 619 GGGSNGASASEMGMANPAVHFFRGLKSRNMNAIRHATQRGITQLQQLQGHNQGNFDFLMKHRSNP 683
Fly 684 LVIQGLRTNPKDAESHILFFDIEGLIFELHSEEYAQMTPATLES-----LGVH------------ 731
Fly 732 --LQNPKDGKSMHLDASKKIGDF-----FN-----------KVKNKAVDVEKILKDKDKHGLVQK 778
Fly 779 FKEKT--------EIVEKKV-QAKVESLQKAVEPHEE----------QQDLKSKIASKMEVTHVM 824
Fly 825 EVAQLLLSLLHSWGLD--------PHLDKM----CETRLGLLRPIV----PISYGVLSKAGYMSL 873
Fly 874 LLPTWQ 879 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rbcn-3B | NP_001284797.1 | WD40 | <11..>204 | CDD:225201 | 34/192 (18%) |
WD40 repeat | 20..63 | CDD:293791 | 13/44 (30%) | ||
WD40 | <22..202 | CDD:295369 | 33/189 (17%) | ||
WD40 repeat | 68..107 | CDD:293791 | 5/38 (13%) | ||
WD40 repeat | 118..152 | CDD:293791 | 2/33 (6%) | ||
WD40 repeat | 160..204 | CDD:293791 | 9/44 (20%) | ||
WD40 repeat | 212..251 | CDD:293791 | 11/49 (22%) | ||
WD40 repeat | 406..459 | CDD:293791 | 16/88 (18%) | ||
WD40 | <449..>607 | CDD:225201 | 51/308 (17%) | ||
WD40 | 453..>597 | CDD:295369 | 46/292 (16%) | ||
WD40 repeat | 513..555 | CDD:293791 | 13/124 (10%) | ||
WD40 repeat | 560..596 | CDD:293791 | 8/46 (17%) | ||
WD40 | <1395..>1469 | CDD:225201 | |||
WD40 | <1399..1495 | CDD:295369 | |||
WD40 repeat | 1439..1466 | CDD:293791 | |||
Tep1 | NP_033377.1 | TEP1 N-terminal 1 | 1..30 | ||
TEP1_N | 1..29 | CDD:283129 | |||
TEP1 N-terminal 2 | 31..60 | ||||
TEP1_N | 31..59 | CDD:283129 | |||
TEP1 N-terminal 3 | 61..90 | ||||
TEP1_N | 62..89 | CDD:283129 | |||
TEP1 N-terminal 4 | 91..120 | ||||
TEP1_N | 91..119 | CDD:283129 | |||
TROVE | 230..685 | CDD:283406 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 386..412 | ||||
DUF4062 | 917..1017 | CDD:290011 | |||
NACHT | 1171..1346 | CDD:283404 | |||
WD 1 | 1420..1462 | ||||
WD 2 | 1681..1720 | 12/101 (12%) | |||
WD40 repeat | 1687..1723 | CDD:293791 | 10/98 (10%) | ||
WD 3 | 1723..1761 | 9/42 (21%) | |||
WD40 repeat | 1729..1764 | CDD:293791 | 8/39 (21%) | ||
WD40 | 1763..2182 | CDD:238121 | 85/472 (18%) | ||
WD 4 | 1764..1803 | 9/42 (21%) | |||
WD40 repeat | 1769..1804 | CDD:293791 | 9/34 (26%) | ||
WD 5 | 1805..1844 | 8/38 (21%) | |||
WD40 | 1806..2198 | CDD:225201 | 75/441 (17%) | ||
WD40 repeat | 1811..1847 | CDD:293791 | 7/35 (20%) | ||
WD 6 | 1847..1886 | 4/38 (11%) | |||
WD40 repeat | 1852..1887 | CDD:293791 | 4/34 (12%) | ||
WD 7 | 1889..1930 | 14/74 (19%) | |||
WD40 repeat | 1895..1930 | CDD:293791 | 11/58 (19%) | ||
WD 8 | 1932..1971 | 8/52 (15%) | |||
WD40 repeat | 1937..2066 | CDD:293791 | 22/132 (17%) | ||
WD 9 | 1974..2013 | 10/39 (26%) | |||
WD40 | 1979..2273 | CDD:238121 | 51/295 (17%) | ||
WD40 repeat | 1979..2014 | CDD:293791 | 9/35 (26%) | ||
WD 10 | 2015..2054 | 5/38 (13%) | |||
WD 11 | 2067..2106 | 9/38 (24%) | |||
WD40 repeat | 2072..2111 | CDD:293791 | 8/39 (21%) | ||
WD 12 | 2113..2151 | 9/37 (24%) | |||
WD40 repeat | 2118..2141 | CDD:293791 | 4/22 (18%) | ||
WD 13 | 2154..2191 | 1/36 (3%) | |||
WD40 repeat | 2159..2190 | CDD:293791 | 0/30 (0%) | ||
WD 14 | 2193..2241 | 6/47 (13%) | |||
WD40 repeat | 2198..2243 | CDD:293791 | 5/44 (11%) | ||
WD 15 | 2244..2282 | 7/37 (19%) | |||
WD40 repeat | 2250..2272 | CDD:293791 | 4/21 (19%) | ||
WD 16 | 2285..2324 | 7/38 (18%) | |||
WD40 repeat | 2290..2322 | CDD:293791 | 6/31 (19%) | ||
WD 17 | 2326..2362 | 10/38 (26%) | |||
WD40 repeat | 2330..2374 | CDD:293791 | 14/73 (19%) | ||
WD 18 | 2375..2424 | 15/75 (20%) | |||
WD40 repeat | 2380..2410 | CDD:293791 | 9/39 (23%) | ||
WD40 | 2408..>2625 | CDD:225201 | 42/218 (19%) | ||
WD40 repeat | 2420..2465 | CDD:293791 | 10/45 (22%) | ||
WD 19 | 2467..2507 | 5/39 (13%) | |||
WD40 repeat | 2472..2495 | CDD:293791 | 3/22 (14%) | ||
WD40 | <2534..>2602 | CDD:295369 | 11/68 (16%) | ||
WD 20 | 2555..2592 | 6/37 (16%) | |||
WD 21 | 2594..2628 | 8/35 (23%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4155 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |