DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Edem1 and MNS1

DIOPT Version :10

Sequence 1:NP_001259152.1 Gene:Edem1 / 31154 FlyBaseID:FBgn0023511 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_012665.3 Gene:MNS1 / 853595 SGDID:S000003892 Length:549 Species:Saccharomyces cerevisiae


Alignment Length:554 Identity:142/554 - (25%)
Similarity:232/554 - (41%) Gaps:133/554 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 ELREDVRRMFQHAYDGYLRHASNYDELRPLTCDGHDT--------WGSYSLTLIDALDTLATMGN 96
            |:|:.:..||..::..|.:|...||...|:....|:.        |     .::|::|||..|.|
Yeast    37 EMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGW-----IIVDSVDTLMLMYN 96

  Fly    97 FT---------EFRRAARLLEEKMDFDRDINVSVFETNIRIVGGLLSAHLLSKRAGVELEPGWPC 152
            .:         |.:|:...:.:.:|||.|..|:||||.||::||||||:.||.    .||.|  .
Yeast    97 SSTLYKSEFEAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSD----VLEVG--N 155

  Fly   153 KGPLLRLAEDVARRLLPAFV-TNTGMPYGTVNLRYGVP---KGETSITCTAGVGTFLIEFGTLSR 213
            |...|..|.|:..||..||: |.||:||.::||..|..   ..:...:.||...|..:||..|:.
Yeast   156 KTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAY 220

  Fly   214 LTGKTIYEDVAMKAVHALWAYRSPIGLFGNHIDV----QSGRWTALDSGIGAGVDSLFEYLVKAS 274
            |||...|.::..:....|:.....:..:...:.:    .:|::.|.....|:..||.:|||:|..
Yeast   221 LTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFYEYLLKQY 285

  Fly   275 VLLNRPELLELFHEARAAIDKYMRKED-----WYVW---VGMNKGRVTLPVFQSLEAFWPGILSI 331
            :|.:.....:|:.::...:.|::..:.     ||:.   .|:: |::: |....|..|..|:|: 
Yeast   286 LLTHETLYYDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLH-GQLS-PKMDHLVCFMGGLLA- 347

  Fly   332 IGDTE----------PALRTISRYIGVW----------------KKYGFLPE------------- 357
            .|.||          |...........|                ...|..||             
Yeast   348 SGSTEGLSIHEARRRPFFSLSLERKSDWDLAKGITDTCYQMYKQSSSGLAPEIVVFNDGNIKQDG 412

  Fly   358 FYNIAAGEASPNREVYPL------RPELIESAMYLYRATGNEYLLEFGEHMLETLEFSAKTKCG- 415
            ::..:.|:..    |.||      |||.:||.|::|..:.:....|:|..:..:...:....|. 
Yeast   413 WWRSSVGDFF----VKPLDRHNLQRPETVESIMFMYHLSHDHKYREWGAEIATSFFENTCVDCND 473

  Fly   416 -----YATIRNVVT--HEKENRMESFFLAETSKYLYLLFDEENFLHNDGSGGELLSTEDDVCVVQ 473
                 :.::.:.:|  .:|.|.||||:||||.||||:||.:                |.|:..| 
Yeast   474 PKLRRFTSLSDCITLPTKKSNNMESFWLAETLKYLYILFLD----------------EFDLTKV- 521

  Fly   474 AGAYIFNTEAHPMDMSALHCCHAHNEDIYTSLDL 507
                :|||||||..:.        :|:|..|..|
Yeast   522 ----VFNTEAHPFPVL--------DEEILKSQSL 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem1NP_001259152.1 Glyco_hydro_47 48..486 CDD:460241 135/523 (26%)
MNS1NP_012665.3 Glyco_hydro_47 45..532 CDD:460241 136/525 (26%)

Return to query results.
Submit another query.