DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edem1 and edem2

DIOPT Version :10

Sequence 1:NP_001259152.1 Gene:Edem1 / 31154 FlyBaseID:FBgn0023511 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_001292543.1 Gene:edem2 / 402801 ZFINID:ZDB-GENE-060519-1 Length:560 Species:Danio rerio


Alignment Length:487 Identity:287/487 - (58%)
Similarity:366/487 - (75%) Gaps:2/487 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LICAVLLVLLSTGVSGQKQYSKARKLELREDVRRMFQHAYDGYLRHASNYDELRPLTCDGHDTWG 78
            :.||..|..:.:.|.| :.:::......|:.|:.||.|||:.||.:|..|||||||||||.||||
Zfish     9 IFCAAYLSPIISHVKG-RDFTEQEMSHYRDRVKSMFYHAYNSYLDNAYPYDELRPLTCDGQDTWG 72

  Fly    79 SYSLTLIDALDTLATMGNFTEFRRAARLLEEKMDFDRDINVSVFETNIRIVGGLLSAHLLSKRAG 143
            |:|||||||||||..:||.|||:|.|.||::.:|||.|:|.||||||||:|||||||||||||||
Zfish    73 SFSLTLIDALDTLLILGNHTEFQRVATLLQDTVDFDIDVNASVFETNIRVVGGLLSAHLLSKRAG 137

  Fly   144 VELEPGWPCKGPLLRLAEDVARRLLPAFVTNTGMPYGTVNLRYGVPKGETSITCTAGVGTFLIEF 208
            :::|.||||.|||||:|||.||:|||||.|.||||||||||..||..|||.:|||||||||::||
Zfish   138 MKVEEGWPCSGPLLRMAEDAARKLLPAFQTPTGMPYGTVNLLRGVNPGETPVTCTAGVGTFILEF 202

  Fly   209 GTLSRLTGKTIYEDVAMKAVHALWAYRSPIGLFGNHIDVQSGRWTALDSGIGAGVDSLFEYLVKA 273
            .|||||||..::|:||.||:.|||..||.|||.||||||.:.:|.|.|:||||||||.||||||.
Zfish   203 STLSRLTGDPVFENVARKALRALWRTRSDIGLVGNHIDVITSKWVAQDAGIGAGVDSYFEYLVKG 267

  Fly   274 SVLLNRPELLELFHEARAAIDKYMRKEDWYVWVGMNKGRVTLPVFQSLEAFWPGILSIIGDTEPA 338
            :::|...:||.:|:|...:|..|.:.:|||:||.|:||.|::||||||||||||:.|:|||...|
Zfish   268 AIMLQDEKLLTMFYEFDKSIKNYTKFDDWYLWVQMHKGTVSMPVFQSLEAFWPGMQSLIGDISSA 332

  Fly   339 LRTISRYIGVWKKYGFLPEFYNIAAGEASPNREVYPLRPELIESAMYLYRATGNEYLLEFGEHML 403
            .::...|..||:::|.|||||:|..|.....||.|||||||||||||||:|||:...::.|...:
Zfish   333 TKSFHNYYSVWRQFGGLPEFYSIPQGYTVDKREGYPLRPELIESAMYLYKATGDPSFIQLGRDAV 397

  Fly   404 ETLEFSAKTKCGYATIRNVVTHEKENRMESFFLAETSKYLYLLFDEENFLHNDGSGGELLSTEDD 468
            |:::..::..||:||:::|..|:.:|||||||||||.||||||||.:|||||.|:..||.....|
Zfish   398 ESIDRISRVNCGFATVKDVRDHKLDNRMESFFLAETIKYLYLLFDPDNFLHNTGTEFELGGLRGD 462

  Fly   469 VCVVQAGAYIFNTEAHPMDMSALHCCHAHNED 500
             |::.||.|:|||||||:|.:|||||....:|
Zfish   463 -CILSAGGYVFNTEAHPLDPAALHCCSREQQD 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem1NP_001259152.1 Glyco_hydro_47 48..486 CDD:460241 272/437 (62%)
edem2NP_001292543.1 Glyco_hydro_47 42..479 CDD:460241 272/437 (62%)

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