DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Edem1 and Man1a2

DIOPT Version :10

Sequence 1:NP_001259152.1 Gene:Edem1 / 31154 FlyBaseID:FBgn0023511 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_034893.1 Gene:Man1a2 / 17156 MGIID:104676 Length:641 Species:Mus musculus


Alignment Length:506 Identity:168/506 - (33%)
Similarity:248/506 - (49%) Gaps:82/506 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GVSGQKQYSKARKLEL---REDVRRMFQHAYDGYLRHASNYDELRPLTCDGHDT--WGSYSL--T 83
            ||||    .....:|:   |:.::.|.:||:|.|..:...::||||:...||.|  :||..:  |
Mouse   166 GVSG----GDPEDMEIKKKRDKIKEMMKHAWDNYRTYGWGHNELRPIARKGHSTNIFGSSQMGAT 226

  Fly    84 LIDALDTLATMGNFTEFRRAARLLEEKMDFDRDINVSVFETNIRIVGGLLSAHLLSKRAGVELEP 148
            ::||||||..||...||....|.:||.:||..:..|||||.|||.:||||:|:.||   |.|:  
Mouse   227 IVDALDTLYIMGLHDEFMDGQRWIEENLDFSVNSEVSVFEVNIRFIGGLLAAYYLS---GEEI-- 286

  Fly   149 GWPCKGPLLRLAEDVARRLLPAFVTNTGMPYGTVNLRYGVPK----GETSITCTAGVGTFLIEFG 209
               .|...::|||    :|||||.|.||:|:..|||:.||.:    .....:..|..||..:||.
Mouse   287 ---FKTKAVQLAE----KLLPAFNTPTGIPWAMVNLKSGVGRNWGWASAGSSILAEFGTLHMEFV 344

  Fly   210 TLSRLTGKTIYEDVAMKAVHALWAYRSPIGLFGNHIDVQSGRWTALDSGIGAGVDSLFEYLVKAS 274
            .||.|||...|.:..|.....|.....|.||:.|:::.::|||....:.:|...||.:|||:||.
Mouse   345 HLSYLTGDLTYYNKVMHIRKLLQKMERPNGLYPNYLNPRTGRWGQYHTSVGGLGDSFYEYLLKAW 409

  Fly   275 VLLNRPELLELFHEAR-------AAIDKYMRKED--WYVWVGMNKGRVTLPVFQSLEAFWPGILS 330
            ::.::.:     ||||       .||:|::.|:.  ..|::|..|..........|..|..|:.:
Mouse   410 LMSDKTD-----HEARRMYDDAVEAIEKHLIKKSRGGLVFIGEWKNGHLERKMGHLACFAGGMFA 469

  Fly   331 IIGD--------------TEPALRTISRYIGVWKKYGFLPEFYNI-AAGEASPNREV---YPLRP 377
            :..|              .|.|......|.....|.|  ||.:.. .|.||...|:.   |.|||
Mouse   470 LGADGSRKDKAGHYLELGAEIARTCHESYDRTALKLG--PESFKFDGAVEAVAVRQAEKYYILRP 532

  Fly   378 ELIESAMYLYRATGNEYLLEFGEHMLETLEFSAKTKCGYATIRNVV--THEKENRMESFFLAETS 440
            |:||:..||:|.|.:....::|......:|.|.:...|::.:::|.  |...::..:|||||||.
Mouse   533 EVIETYWYLWRFTHDPRYRQWGWEAALAIEKSCRVSGGFSGVKDVYAPTPVHDDVQQSFFLAETL 597

  Fly   441 KYLYLLFDEENFLHNDGSGGELLSTEDDVCVVQAGAYIFNTEAHPMDMSAL 491
            |||||||          ||.:||..:.         ::|||||||:.:..|
Mouse   598 KYLYLLF----------SGDDLLPLDH---------WVFNTEAHPLPVLRL 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem1NP_001259152.1 Glyco_hydro_47 48..486 CDD:460241 160/474 (34%)
Man1a2NP_034893.1 PTZ00121 <109..208 CDD:173412 14/45 (31%)
Glyco_hydro_47 187..626 CDD:460241 161/476 (34%)

Return to query results.
Submit another query.