DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edem1 and MMP24-AS1-EDEM2

DIOPT Version :10

Sequence 1:NP_001259152.1 Gene:Edem1 / 31154 FlyBaseID:FBgn0023511 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_001341937.1 Gene:MMP24-AS1-EDEM2 / 111089941 -ID:- Length:537 Species:Homo sapiens


Alignment Length:518 Identity:300/518 - (57%)
Similarity:379/518 - (73%) Gaps:12/518 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 MFQHAYDGYLRHASNYDELRPLTCDGHDTWGSYSLTLIDALDTLATMGNFTEFRRAARLLEEKMD 112
            ||.||||.||.:|..:||||||||||||||||:|||||||||||..:||.:||:|...:|::.:|
Human     1 MFYHAYDSYLENAFPFDELRPLTCDGHDTWGSFSLTLIDALDTLLILGNVSEFQRVVEVLQDSVD 65

  Fly   113 FDRDINVSVFETNIRIVGGLLSAHLLSKRAGVELEPGWPCKGPLLRLAEDVARRLLPAFVTNTGM 177
            ||.|:|.||||||||:||||||||||||:||||:|.||||.|||||:||:.||:|||||.|.|||
Human    66 FDIDVNASVFETNIRVVGGLLSAHLLSKKAGVEVEAGWPCSGPLLRMAEEAARKLLPAFQTPTGM 130

  Fly   178 PYGTVNLRYGVPKGETSITCTAGVGTFLIEFGTLSRLTGKTIYEDVAMKAVHALWAYRSPIGLFG 242
            |||||||.:||..|||.:|||||:|||::||.|||.|||..::||||..|:..||..||.|||.|
Human   131 PYGTVNLLHGVNPGETPVTCTAGIGTFIVEFATLSSLTGDPVFEDVARVALMRLWESRSDIGLVG 195

  Fly   243 NHIDVQSGRWTALDSGIGAGVDSLFEYLVKASVLLNRPELLELFHEARAAIDKYMRKEDWYVWVG 307
            |||||.:|:|.|.|:||||||||.||||||.::||...:|:.:|.|...||..|.|.:|||:||.
Human   196 NHIDVLTGKWVAQDAGIGAGVDSYFEYLVKGAILLQDKKLMAMFLEYNKAIRNYTRFDDWYLWVQ 260

  Fly   308 MNKGRVTLPVFQSLEAFWPGILSIIGDTEPALRTISRYIGVWKKYGFLPEFYNIAAGEASPNREV 372
            |.||.|::||||||||:|||:.|:|||.:.|:||...|..|||::|.|||||||..|.....||.
Human   261 MYKGTVSMPVFQSLEAYWPGLQSLIGDIDNAMRTFLNYYTVWKQFGGLPEFYNIPQGYTVEKREG 325

  Fly   373 YPLRPELIESAMYLYRATGNEYLLEFGEHMLETLEFSAKTKCGYATIRNVVTHEKENRMESFFLA 437
            |||||||||||||||||||:..|||.|...:|::|..:|.:||:|||:::..|:.:|||||||||
Human   326 YPLRPELIESAMYLYRATGDPTLLELGRDAVESIEKISKVECGFATIKDLRDHKLDNRMESFFLA 390

  Fly   438 ETSKYLYLLFDEENFLHNDGSGGELLSTEDDVCVVQAGAYIFNTEAHPMDMSALHCCHAHNEDIY 502
            ||.||||||||..||:||:||..:.:.|....|::.||.|||||||||:|.:|||||....|:.:
Human   391 ETVKYLYLLFDPTNFIHNNGSTFDAVITPYGECILGAGGYIFNTEAHPIDPAALHCCQRLKEEQW 455

  Fly   503 TSLDLQR--FSPRAILERSK---KRQVAVQEQWVPQCHPENNEFFNKEDESVQAQDSEKEQER 560
            ...||.|  :|    |:||:   ::.......|.|...|  ...|:.|:.. ||::.:..:::
Human   456 EVEDLMREFYS----LKRSRSKFQKNTVSSGPWEPPARP--GTLFSPENHD-QARERKPAKQK 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem1NP_001259152.1 Glyco_hydro_47 48..486 CDD:460241 278/437 (64%)
MMP24-AS1-EDEM2NP_001341937.1 Glyco_hydro_47 1..439 CDD:460241 278/437 (64%)

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