DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edem1 and LOC101882461

DIOPT Version :10

Sequence 1:NP_001259152.1 Gene:Edem1 / 31154 FlyBaseID:FBgn0023511 Length:1004 Species:Drosophila melanogaster
Sequence 2:XP_073781661.1 Gene:LOC101882461 / 101882461 -ID:- Length:637 Species:Danio rerio


Alignment Length:495 Identity:157/495 - (31%)
Similarity:240/495 - (48%) Gaps:71/495 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SKARKLELREDVRRMFQHAYDGYLRHASNYDELRPLTCDGH--DTWGSY-SLTLIDALDTLATMG 95
            |.:..|:.||.|:.|.:.|:|.|..:|...:||||||.:||  :.:|.. ..:::|:||||..||
Zfish   170 SDSGTLQRREKVKEMMKFAWDNYKLYAWGKNELRPLTRNGHIGNMFGGLRGASIVDSLDTLYIMG 234

  Fly    96 NFTEFRRAARLLEEKMDFDRDINVSVFETNIRIVGGLLSAHLLSKRAGVELEPGWPCKGPLLRLA 160
            ...|:..|...::..:|.:.:...|:||.|||.|||||||..|:   |.|:     .|..:|.|.
Zfish   235 LMEEYEEAKEWVQSNLDLNSNGEASLFEVNIRYVGGLLSAFYLT---GAEI-----FKQKVLELG 291

  Fly   161 EDVARRLLPAFVTNTGMPYGTVNL-------RYGVPKGETSITCTAGVGTFLIEFGTLSRLTGKT 218
            |    :|||||.|.||:|.|.:||       .:|.....:||  .|..||..:||..||.|:|..
Zfish   292 E----KLLPAFNTPTGIPRGVINLGSSGTSWSWGWASAGSSI--LAEFGTLHLEFVHLSELSGNP 350

  Fly   219 IYEDVAMKAVHALWAYRSPIGLFGNHIDVQSGRWTALDSGIGAGVDSLFEYLVKASVLLNR--PE 281
            ::.:..|.....|.....|.||:.|.:...||.|......||...||.:|||:|:.::.::  .|
Zfish   351 VFTEKVMNIRKLLDKIEKPHGLYPNFLSPVSGNWVQHHVSIGGLGDSFYEYLIKSFLMSDKTDEE 415

  Fly   282 LLELFHEARAAIDKYM--RKEDWYVWVGMNKGRVTLPVFQSLEAFWPGILSIIGDTEPALRTISR 344
            ..::::.|..||:..:  :......:|...:|.:.......|..|..|::.|..:..||.:. ..
Zfish   416 AKKMYYSAMEAIEMNLVQKSPGGLTYVAEWRGGILDHKMGHLACFCGGMIGIGAEDAPAGQK-QH 479

  Fly   345 YIGV---------------WKKYGFLPEFYNIAAG-EASPNR---EVYPLRPELIESAMYLYRAT 390
            |:.:               ..|.|  ||.:....| ||:..|   ..|.||||::||.||::|.|
Zfish   480 YLDLAGQITHTCHESYSRSATKLG--PEAFRFDGGAEATATRLSDRYYILRPEVVESYMYMWRLT 542

  Fly   391 GNEYLLEFGEHMLETLEFSAKTKCGYATIRNVV--THEKENRMESFFLAETSKYLYLLFDEENFL 453
            .:....|:|...:|.||...:...|::.||:|.  :...:|..:||||:||.|||||||.::   
Zfish   543 HDPKYREWGWEAVEALEKHCRVDAGFSGIRDVYASSDSHDNMQQSFFLSETLKYLYLLFSDD--- 604

  Fly   454 HNDGSGGELLSTEDDVCVVQAGAYIFNTEAHPMDMSALHC 493
                   :||..||         ::|||||||:.:....|
Zfish   605 -------DLLPLED---------WVFNTEAHPLPIIRKAC 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem1NP_001259152.1 Glyco_hydro_47 48..486 CDD:460241 150/472 (32%)
LOC101882461XP_073781661.1 None

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