DRSC/TRiP Functional Genomics Resources

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Protein Alignment mip130 and Lin9

DIOPT Version :9

Sequence 1:NP_569958.2 Gene:mip130 / 31153 FlyBaseID:FBgn0023509 Length:986 Species:Drosophila melanogaster
Sequence 2:NP_001096652.2 Gene:Lin9 / 72568 MGIID:1919818 Length:558 Species:Mus musculus


Alignment Length:710 Identity:216/710 - (30%)
Similarity:308/710 - (43%) Gaps:207/710 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 DEEPDSNENSAPEEQVEPPAFSLATLGLQRVGSAPPPKPKVQKAPI-------PTLNARGMPARI 140
            |:.||  |:|:.:..|.....||:....::..|       :||.|:       |.:.   ||.|.
Mouse    21 DQLPD--ESSSAKALVSLKEGSLSNTWNEKYSS-------LQKTPVWKGRNAGPAVE---MPFRN 73

  Fly   141 RKRNRLFYDENIINDDKPLRMSLAPKKTPGRPPQSAGGGSSQKIPLTPSKVLKKRKGVVSRYMRS 205
            .||:|||.||    ||:.:.     .|:|.|         :|::.:.|.|.              
Mouse    74 SKRSRLFSDE----DDRQIN-----TKSPKR---------NQRVAMIPQKF-------------- 106

  Fly   206 SEQGTNSVSASNQPQLLGKHKKATPSKSQSVGSKLGSGGPKTGRGAHFIGKGTAAAVAAVAAAEE 270
                |.::|              ||.|..|                                   
Mouse   107 ----TATMS--------------TPDKKAS----------------------------------- 118

  Fly   271 EANQAEAAALANKRLGQSIGLRLRNLLKLPKAHKWAIAEWFYSYVDKPLFECRDEFMNHVNELAP 335
                            |.||.||||||||||||||.|.|||||.:||||||..::|...:.|..|
Mouse   119 ----------------QKIGFRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFP 167

  Fly   336 RLGTRSLIRHEWVNIRRRMGRPRRCSAKFFSEERKELDRKRQVIRTLQSRKPGEFKDSVSMLSDM 400
            .|.||.|.|.||..|||.||:|||||:.||.|||..|.:|||.||.||.||..:    ||...|:
Mouse   168 NLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVAD----VSQFKDL 228

  Fly   401 PEKIPMTLPLGTKVTARLRSPQDGIFAGTVAAYDSLNAMYRVTFERIGLGTHAIPDYEIVSENFH 465
            |::||:.|.:|||||||||...||:|.|.:.|.|:|||.|||||:|.|||||.|||||::|...|
Mouse   229 PDEIPLPLVIGTKVTARLRGIHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPH 293

  Fly   466 EMLPLHSFTKDFRPNLMSIYQTNNLGFTTNLGFTANLTNNYLQKKEKIDGGAGAAAGAGSLYF-- 528
            |.:|:.:|.:..||                                             |.:|  
Mouse   294 ETMPISAFGQKQRP---------------------------------------------SRFFMT 313

  Fly   529 KPQKHLATNNAAARNALSMKLNKSDPLLGQDSVGVSPIRQQLTRN-----RGYSTSLLEHLVRLE 588
            .|:.|...       .|...:...||||||     ||.|.:::.:     .|:....|..:.:|.
Mouse   314 PPRLHYTP-------PLQSPITDGDPLLGQ-----SPWRSKVSGSDTETLGGFPVEFLIQVTKLS 366

  Fly   589 KYIAVKADRIQRLNKMNGTAELAMGDMISHDENGDRHRRQIAVNFQRQYAFNIVTIERINAELMF 653
            |.:.:|.:.|::|.:||..||....           :...|.:.|||:||..::.:|::|.:|..
Mouse   367 KILMIKKEHIKKLREMNTEAEKLKS-----------YSMPIGIEFQRRYATIVLELEQLNKDLNK 420

  Fly   654 ELTKVQELSSSLTRNPNVQAMISPTYLREECRAKASQTVDDINKG----MVKNTRMIKLLKDLTT 714
            .|.|||:....|..:..:|....||.:|..|..:|.:.|...|..    .|:|..:..|:..||.
Mouse   421 VLHKVQQYCYELAPDQGLQPADQPTDMRRRCEEEAQEIVRQANSASGQPCVENENLTDLISRLTA 485

  Fly   715 LLIVTQNL--GGDCEVSEVNEVLEGCLEEVRSNLICSENREVFQMSVQGRLEYIAMDISR 772
            :|:..:.|  |||....|...:.:. |.::: |.|.:.|...||.:|:..:.:|...:|:
Mouse   486 ILLQIKCLAEGGDLNSFEFKSLTDS-LNDIK-NTIDASNISCFQNNVEIHVAHIQSGLSQ 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mip130NP_569958.2 DIRP 311..419 CDD:284095 58/107 (54%)
Lin9NP_001096652.2 DIRP 143..247 CDD:284095 58/107 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831124
Domainoid 1 1.000 151 1.000 Domainoid score I4346
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H35252
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005813
OrthoInspector 1 1.000 - - oto95088
orthoMCL 1 0.900 - - OOG6_106727
Panther 1 1.100 - - LDO PTHR21689
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2615
SonicParanoid 1 1.000 - - X4787
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.870

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