DRSC/TRiP Functional Genomics Resources

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Protein Alignment mip130 and LIN9

DIOPT Version :9

Sequence 1:NP_569958.2 Gene:mip130 / 31153 FlyBaseID:FBgn0023509 Length:986 Species:Drosophila melanogaster
Sequence 2:XP_024302333.1 Gene:LIN9 / 286826 HGNCID:30830 Length:581 Species:Homo sapiens


Alignment Length:660 Identity:199/660 - (30%)
Similarity:283/660 - (42%) Gaps:212/660 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 VQKAPI----PTLNARGMPARIRKRNRLFYDENIINDDKPLRMSLAPKKTPGRPPQSAGGGSSQK 183
            :||.|:    .|.:|..||.|..||:|||.||    ||:.:. :.:||:             :|:
Human   109 LQKTPVWKGRNTSSAVEMPFRNSKRSRLFSDE----DDRQIN-TRSPKR-------------NQR 155

  Fly   184 IPLTPSKVLKKRKGVVSRYMRSSEQGTNSVSASNQPQLLGKHKKATPSKSQSVGSKLGSGGPKTG 248
            :.:.|.|.                  |.::|              ||.|..|             
Human   156 VAMVPQKF------------------TATMS--------------TPDKKAS------------- 175

  Fly   249 RGAHFIGKGTAAAVAAVAAAEEEANQAEAAALANKRLGQSIGLRLRNLLKLPKAHKWAIAEWFYS 313
                                                  |.||.||||||||||||||.|.|||||
Human   176 --------------------------------------QKIGFRLRNLLKLPKAHKWCIYEWFYS 202

  Fly   314 YVDKPLFECRDEFMNHVNELAPRLGTRSLIRHEWVNIRRRMGRPRRCSAKFFSEERKELDRKRQV 378
            .:||||||..::|...:.|..|.|.||.|.|.||..|||.||:|||||:.||.|||..|.:|||.
Human   203 NIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQK 267

  Fly   379 IRTLQSRKPGEFKDSVSMLSDMPEKIPMTLPLGTKVTARLRSPQDGIFAGTVAAYDSLNAMYRVT 443
            ||.||.||..:    ||...|:|::||:.|.:|||||||||...||:|.|.:.|.|:|||.||||
Human   268 IRLLQQRKVAD----VSQFKDLPDEIPLPLVIGTKVTARLRGVHDGLFTGQIDAVDTLNATYRVT 328

  Fly   444 FERIGLGTHAIPDYEIVSENFHEMLPLHSFTKDFRPNLMSIYQTNNLGFTTNLGFTANLTNNYLQ 508
            |:|.|||||.|||||::|...||.:|:.:|.:..||:                            
Human   329 FDRTGLGTHTIPDYEVLSNEPHETMPIAAFGQKQRPS---------------------------- 365

  Fly   509 KKEKIDGGAGAAAGAGSLYFKPQKHLATNNAAARNALSMKLNKSDPLLGQDSVGVSPIRQQLTRN 573
                            ..:..|.                :|:.:.||       .|||       
Human   366 ----------------RFFMTPP----------------RLHYTPPL-------QSPI------- 384

  Fly   574 RGYSTSLLEHLVRLEKYIAVKADRIQRLNKMNGTAELAMGDMISHDENGDRHRRQIAVNFQRQYA 638
                      :.||.|.:.:|.:.|::|.:||..||....           :...|::.|||:||
Human   385 ----------ITRLSKILMIKKEHIKKLREMNTEAEKLKS-----------YSMPISIEFQRRYA 428

  Fly   639 FNIVTIERINAELMFELTKVQELSSSLTRNPNVQAMISPTYLREECRAKASQTVDDINKG----M 699
            ..::.:|::|.:|...|.|||:....|..:..:|....||.:|..|..:|.:.|...|..    .
Human   429 TIVLELEQLNKDLNKVLHKVQQYCYELAPDQGLQPADQPTDMRRRCEEEAQEIVRHANSSTGQPC 493

  Fly   700 VKNTRMIKLLKDLTTLLIVTQNL--GGDCEVSEVNEVLEGCLEEVRSNLICSENREVFQMSVQGR 762
            |:|..:..|:..||.:|:..:.|  |||....|...:.:. |.:::|.:..| |...||.:|:..
Human   494 VENENLTDLISRLTAILLQIKCLAEGGDLNSFEFKSLTDS-LNDIKSTIDAS-NISCFQNNVEIH 556

  Fly   763 LEYIAMDISR 772
            :.:|...:|:
Human   557 VAHIQSGLSQ 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mip130NP_569958.2 DIRP 311..419 CDD:284095 58/107 (54%)
LIN9XP_024302333.1 DIRP 200..304 CDD:310884 58/107 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141178
Domainoid 1 1.000 151 1.000 Domainoid score I4356
eggNOG 1 0.900 - - E1_KOG1019
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H35252
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D279992at33208
OrthoFinder 1 1.000 - - FOG0005813
OrthoInspector 1 1.000 - - oto91505
orthoMCL 1 0.900 - - OOG6_106727
Panther 1 1.100 - - LDO PTHR21689
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2615
SonicParanoid 1 1.000 - - X4787
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.740

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