DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment arm and URK1

DIOPT Version :9

Sequence 1:	NP_001259149.1	Gene:	arm / 31151	FlyBaseID:	FBgn0000117	Length:	843	Species:	Drosophila melanogaster
Sequence 2:	NP_014409.1	Gene:	URK1 / 855746	SGDID:	S000005295	Length:	501	Species:	Saccharomyces cerevisiae

Alignment Length:	132	Identity:	28/132 - (21%)
Similarity:	55/132 - (41%)	Gaps:	26/132 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly   165 IKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMN----------SPQMVAALVRAISNSNDLEST 219
            :|:..|.|..|     .:..:||:...||...::          .|..|..:...:.|::.:..:
Yeast   181 LKIYVDADLDV-----CLARRLSRDIVSRGRDLDGCIQQWEKFVKPNAVKFVKPTMKNADAIIPS 240

  Fly   220 KAAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSSPVESVL----------FYAITTLHNLLLH 273
            .:...|..|| .:|.:..|.:..:..:..|:||.|||.:.||          ...:.:||.:||:
Yeast   241 MSDNATAVNLIINHIKSKLELKSNEHLRELIKLGSSPSQDVLNRNIIHELPPTNQVLSLHTMLLN 305

  Fly   274 QD 275
            ::
Yeast   306 KN 307

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
arm	NP_001259149.1	Adaptin_N	<150..>314	CDD:331138	28/132 (21%)
		armadillo repeat	161..186	CDD:293788	4/20 (20%)
		armadillo repeat	193..231	CDD:293788	7/48 (15%)
		armadillo repeat	238..270	CDD:293788	10/41 (24%)
		armadillo repeat	278..314	CDD:293788
		armadillo repeat	320..355	CDD:293788
		Arm	361..398	CDD:278915
		armadillo repeat	362..397	CDD:293788
		armadillo repeat	410..435	CDD:293788
		Arm	439..481	CDD:278915
		armadillo repeat	443..481	CDD:293788
		armadillo repeat	490..525	CDD:293788
		Arm	597..636	CDD:278915
		armadillo repeat	600..636	CDD:293788
		armadillo repeat	641..675	CDD:293788
URK1	NP_014409.1	udk	69..260	CDD:272977	15/83 (18%)
URK1	NP_014409.1	Upp	280..501	CDD:223113	6/28 (21%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0572
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900