Protein Alignment arm and PUB38

DIOPT Version :9

• Sequence 1: NP_001259149.1
• Gene: arm / 31151
• FlyBaseID: FBgn0000117
• Length: 843
• Species: Drosophila melanogaster
• Sequence 2: NP_201323.1
• Gene: PUB38 / 836643
• AraportID: AT5G65200
• Length: 556
• Species: Arabidopsis thaliana
• Alignment Length: 424
• Identity: 90/424 - (21%)
• Similarity: 160/424 - (37%)
• Gaps: 105/424 - (24%)

  Fly    16 QYNPPDLPPMVSAKEQTLMWQQNSYLGDSGIHSGAVTQVPSLSGKEDEEMEGDPLMFDLDTGFPQ 80
            |..|||:...||  ||.|:             .....:.|.:....|.|:.|.
plant   125 QMPPPDVEIRVS--EQELL-------------RAVAHRAPMIIHHADSELMGR------------ 162

  Fly    81 NFTQDQVDDMNQQLSQTRSQRVRAAMFPETLEEGIEIPSTQFDPQQPTAVQRLSEPSQMLKHAVV 145
                   .|.|.  |.|.|            :|.:.:..:.|.|...|.......||.....:.:
plant   163 -------RDFNN--STTSS------------DESVIVAHSPFTPLPLTTRPACFSPSPSSSSSEI 206

  Fly   146 NLINYQDDAELATRAIPELIKLLNDEDQVVVS-----------QAAMMVHQLSKKEASRHAIMNS 199
            ..:.:......:|....|       ||:|:.:           |..:|:.::::........:.|
plant   207 ETLTHHTFFSNSTSTATE-------EDEVIYNKLKSSEIFDQEQGLIMMRKMTRTNDEARVSLCS 264

  Fly   200 PQMVAALVRAISNSNDLESTKAAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAI 264
            |::::.|...|.:...|..|. |:.:|.|||..::..|.|.:.|.:|.|:.:|.|.......:|.
plant   265 PRILSLLKNMIVSRYSLVQTN-ALASLVNLSLDKKNKLTIVRLGFVPILIDVLKSGSREAQEHAA 328

  Fly   265 TTLHNLLLHQDGSKMAVRLAGGLQKMVTLL------QRNNVKFLAIVTDCLQILAYGNQESKLII 323
            .|:.:|.| :|.:||.:.:.|.||.::..|      :..:...||:....|      ||.::..:
plant   329 GTIFSLSL-EDDNKMPIGVLGALQPLLHALRAAESDRTRHDSALALYHLTL------NQTNRSKL 386

  Fly   324 LASGGPNELVRIMRSYDYEKLLWTTSRVLKV---LSVCSSNKPAIVDAGGMQALAMHLGNM---- 381
            :..|....|..::||.:      :.||.|.|   |:.||..:.|::||   .|:|:.:|.:
plant   387 VRLGAVPALFSMVRSGE------SASRALLVICNLACCSEGRSAMLDA---NAVAILVGKLREEW 442

  Fly   382 ---------SPRLVQNCLWTLRNLSDAATKVEGL 406
                     |....:||:..|..||..:.:.:||
plant   443 TEEPTEARSSSSARENCVAALFALSHESLRFKGL 476

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
arm	NP_001259149.1	Adaptin_N	<150..>314	CDD:331138	39/180 (22%)
		armadillo repeat	161..186	CDD:293788	6/35 (17%)
		armadillo repeat	193..231	CDD:293788	10/37 (27%)
		armadillo repeat	238..270	CDD:293788	8/31 (26%)
		armadillo repeat	278..314	CDD:293788	9/41 (22%)
		armadillo repeat	320..355	CDD:293788	8/37 (22%)
		Arm	361..398	CDD:278915	11/49 (22%)
		armadillo repeat	362..397	CDD:293788	10/47 (21%)
		armadillo repeat	410..435	CDD:293788
		Arm	439..481	CDD:278915
		armadillo repeat	443..481	CDD:293788
		armadillo repeat	490..525	CDD:293788
		Arm	597..636	CDD:278915
		armadillo repeat	600..636	CDD:293788
		armadillo repeat	641..675	CDD:293788
PUB38	NP_201323.1	Ubox	36..101	CDD:128780
		armadillo repeat	265..293	CDD:293788	7/28 (25%)
		PLN03200	285..>495	CDD:215629	53/209 (25%)
		armadillo repeat	300..336	CDD:293788	10/35 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910