DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment arm and AT3G54790

DIOPT Version :9

Sequence 1:	NP_001259149.1	Gene:	arm / 31151	FlyBaseID:	FBgn0000117	Length:	843	Species:	Drosophila melanogaster
Sequence 2:	NP_001325795.1	Gene:	AT3G54790 / 824644	AraportID:	AT3G54790	Length:	760	Species:	Arabidopsis thaliana

Alignment Length:	749	Identity:	139/749 - (18%)
Similarity:	277/749 - (36%)	Gaps:	205/749 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly    55 PSLSGKEDEEMEGDPLMF----DLDTGFPQNFTQDQVDDMNQQLS---------------QTRSQ 100
            |.|....|.::..|..::    |||:  ..|..::.::|.:.:||               ||.|.
plant    46 PLLDEVVDCKIPSDDCLYKGCEDLDS--VVNQAREFLEDWSPKLSKLFGVFQCEVLLGKVQTCSL 108

  Fly   101 RVRAAMF------PETLE-EGIE--IPSTQFDPQQPTAVQRLSEPSQMLKHAVVNLINYQDDAEL 156
            .:...:.      |.|.. :.:|  :..|:...|:.|.::.:....:..|..:.:|.|..
plant   109 EISRILLQLSQSSPVTSSVQSVERCVQETESFKQEGTLMELMENALRNQKDDITSLDNNH----- 168

  Fly   157 ATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVRAISNSNDLESTKA 221
             ..:|.:::.|::::|  ::.::..:..:..:.:||:                  :..|:|.|:.
plant   169 -LESIIQMLGLISNQD--LLKESITVEKERIRSQASK------------------SEEDMEQTEQ 212

  Fly   222 AVGTLHNLSHH--RQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQDGSKMAVRLA 284
            .:..:..:..|  :...|.:.|...||...:   .|:.:          .|:|.      .|.:|
plant   213 LIELVLCIREHMLKTEFLEVAKGISIPPYFR---CPLST----------ELMLD------PVIVA 258

  Fly   285 GGLQKMVTLLQRNNVK-----FLAIVTDCLQILAYGNQESKLIILASGGPNELVRIMRSYDYEKL 344
            .|     ....|.::|     .||:.....|:|.:    .:||      ||..|:.|.:
plant   259 SG-----QTFDRTSIKKWLDNGLAVCPRTRQVLTH----QELI------PNYTVKAMIA------ 302

  Fly   345 LWTTSRVLKVLSVCSSNKPAIVDAGGMQALAMHLGNMSPRLVQNCLWTLRNLS-DAATKVE---G 405
            .|..:..:.:    ::|.....|.|...::|.::|:......::..::||:.| .:.:.:|   |
plant   303 SWLEANRINL----ATNSCHQYDGGDASSMANNMGSQDFNRTESFRFSLRSSSLTSRSSLETGNG 363

  Fly   406 LEAL---------------------------------LQSLVQVLGSTDV--NVVTCAAGIL--- 432
            .|.|                                 .:|:..|:.|.|.  :|......||
plant   364 FEKLKINVSASLCGESQSKDLEIFELLSPGQSYTHSRSESVCSVVSSVDYVPSVTHETESILGNH 428

  Fly   433 ---------SNLTCNNQRN------KATVCQVGGVD-----------ALVRTIINAGDREEITEP 471
                     .||..:|..|      |...|.|..:|           .||..:.:..::  :...
plant   429 QSSSEMSPKKNLESSNNVNHEHSAAKTYECSVHDLDDSGTMTTSHTIKLVEDLKSGSNK--VKTA 491

  Fly   472 AVCALRHLTSRHVDSELAQNAVRLNYG----LSVIVKLLHPPSRWPLIKAVIGLIRNLALCPANH 532
            |...:||||...:::       |::.|    ::.::.||:...:.....||..|: ||::...|.
plant   492 AAAEIRHLTINSIEN-------RVHIGRCGAITPLLSLLYSEEKLTQEHAVTALL-NLSISELNK 548

  Fly   533 APLREHGAIHHLVRLLM----RAFQDTERQRSSIATTGSQQPSAYADGVRMEEIV----EGT--- 586
            |.:.|.|||..||.:|.    ||.:::.....|::.....:.........::.:|    :||
plant   549 AMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRG 613

  Fly   587 ----VGALHILARESHNRALIRQQSVIPIFVRLLFNEIENIQRVAAGVLCELAADKEGAEIIEQE 647
                ..||..|:....|:|.|.|...:...|.||..::|.:.: |..:|..|:|..||.:.|.:|
plant   614 KKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLEMVDK-AVALLANLSAVGEGRQAIVRE 677

  Fly   648 GATGPLTDLLHSRNEGVATYAAAVLFRMSEDKPQ 681
            |....|.:.:...::.....||:||.::..:.|:
plant   678 GGIPLLVETVDLGSQRGKENAASVLLQLCLNSPK 711

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
arm	NP_001259149.1	Adaptin_N	<150..>314	CDD:331138	25/170 (15%)
		armadillo repeat	161..186	CDD:293788	3/24 (13%)
		armadillo repeat	193..231	CDD:293788	3/37 (8%)
		armadillo repeat	238..270	CDD:293788	4/31 (13%)
		armadillo repeat	278..314	CDD:293788	9/40 (23%)
		armadillo repeat	320..355	CDD:293788	7/34 (21%)
		Arm	361..398	CDD:278915	8/37 (22%)
		armadillo repeat	362..397	CDD:293788	6/34 (18%)
		armadillo repeat	410..435	CDD:293788	7/38 (18%)
		Arm	439..481	CDD:278915	12/58 (21%)
		armadillo repeat	443..481	CDD:293788	10/48 (21%)
		armadillo repeat	490..525	CDD:293788	7/38 (18%)
		Arm	597..636	CDD:278915	11/38 (29%)
		armadillo repeat	600..636	CDD:293788	10/35 (29%)
		armadillo repeat	641..675	CDD:293788	8/33 (24%)
AT3G54790	NP_001325795.1	U-box	238..310	CDD:398320	21/111 (19%)
		PLN03200	<511..>754	CDD:215629	49/203 (24%)
		armadillo repeat	516..541	CDD:293788	5/25 (20%)
		armadillo repeat	548..584	CDD:293788	11/35 (31%)
		armadillo repeat	599..624	CDD:293788	5/24 (21%)
		armadillo repeat	631..666	CDD:293788	10/35 (29%)
		armadillo repeat	671..702	CDD:293788	6/30 (20%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910