DRSC/TRiP Functional Genomics Resources

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Protein Alignment arm and Uckl1

DIOPT Version :9

Sequence 1:NP_001259149.1 Gene:arm / 31151 FlyBaseID:FBgn0000117 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001365934.1 Gene:Uckl1 / 68556 MGIID:1915806 Length:549 Species:Mus musculus


Alignment Length:255 Identity:47/255 - (18%)
Similarity:93/255 - (36%) Gaps:66/255 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LSGKEDEEMEGDPLMFDLDTGFPQNFTQDQVDDMNQQLSQTRSQRVRAAMFPETLEEGIEIPSTQ 121
            |:.::.|:...:...||    .|..|..|.:....::|.|.||               :::|...
Mouse   139 LTQQQQEQAACNNFNFD----HPDAFDFDLIISTLKKLKQGRS---------------VQVPIYD 184

  Fly   122 FDPQQPTAVQRLSEPSQMLKHAVVNLINYQDDAELATRAIPELI--KLLNDEDQVV--------- 175
            |     |...|..:...:..   .|:|.::.....|.:.:.||:  |:..|.|..:         
Mouse   185 F-----TTHSRKKDWKTLYG---ANVIIFEGIMAFADKTLLELLDMKIFVDTDSDIRLVRRLRRD 241

  Fly   176 VSQAAM----MVHQLSK--KEASRHAIMNSPQMVAALV-RAISNS-----------NDLESTK-- 220
            :|:...    ::.|.:|  |.|....|..:.::...:| |...|:           :.||..|  
Mouse   242 ISERGRDIEGVIKQYNKFVKPAFDQYIQPTMRLADIVVPRGSGNTVAIDLIVQHVHSQLEERKLR 306

  Fly   221 ---AAVGTLHNLSHHRQGLLAIFKS----GGIPALVKLLSSPVESVLFYAITTLHNLLLH 273
               ||:.:.|. .|.....|::.||    .|:..:::...:..:..:||:...:..|:.|
Mouse   307 WDMAALASAHQ-CHPLPQTLSVLKSTPQVRGMHTIIRDKETSRDEFIFYSKRLMRLLIEH 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
armNP_001259149.1 Adaptin_N <150..>314 CDD:331138 30/162 (19%)
armadillo repeat 161..186 CDD:293788 6/39 (15%)
armadillo repeat 193..231 CDD:293788 10/54 (19%)
armadillo repeat 238..270 CDD:293788 5/35 (14%)
armadillo repeat 278..314 CDD:293788
armadillo repeat 320..355 CDD:293788
Arm 361..398 CDD:278915
armadillo repeat 362..397 CDD:293788
armadillo repeat 410..435 CDD:293788
Arm 439..481 CDD:278915
armadillo repeat 443..481 CDD:293788
armadillo repeat 490..525 CDD:293788
Arm 597..636 CDD:278915
armadillo repeat 600..636 CDD:293788
armadillo repeat 641..675 CDD:293788
Uckl1NP_001365934.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..74
UMPK 101..299 CDD:238981 32/186 (17%)
UPRTase 330..533 CDD:405383 6/36 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0572
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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