DRSC/TRiP Functional Genomics Resources

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Protein Alignment arm and si:ch211-243j20.2

DIOPT Version :10

Sequence 1:NP_476665.2 Gene:arm / 31151 FlyBaseID:FBgn0000117 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_021324336.1 Gene:si:ch211-243j20.2 / 563597 ZFINID:ZDB-GENE-041014-345 Length:542 Species:Danio rerio


Alignment Length:519 Identity:92/519 - (17%)
Similarity:161/519 - (31%) Gaps:193/519 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GKEDEEMEGDPLMFDLDTGFPQNFTQDQVDDMNQQLSQTRSQRVRAAMFPETLEEGIEIPSTQFD 123
            |:|||:.     |...|:|      :|.:|.:         .|.|..:.|            ...
Zfish    18 GEEDEQS-----MSRSDSG------EDSLDGL---------LRNRCPLTP------------SIS 50

  Fly   124 PQQPTAVQRLSEPSQM----------------------LKHA-VVNLINYQDDAELATRAIPELI 165
            |::.|..|..:||..:                      .|.| |:.|..  ..|...|....::|
Zfish    51 PRKRTTSQSKTEPPLLRTNKRTIYTAGRPPWYNVTGTTFKEAFVIGLCG--GSASGKTTVANKII 113

  Fly   166 KLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNS-----P-----QMVAALVRAISNSNDLESTK 220
            :.|:....|::|..:.  :::..|:|...|..|.     |     :::..::|.:.....::   
Zfish   114 EALDVPWVVLLSMDSF--YKVLSKDAQELAAKNEYNFDHPDAFDFELLVTVLRKLKKGKSIK--- 173

  Fly   221 AAVGTLHNLSHHR---------------QGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 270
              |......:|.|               :|:||....    .|:|||...|              
Zfish   174 --VPVYDFTTHSRRKEWKTVYGANVVIFEGILAFANK----ELLKLLDMKV-------------- 218

  Fly   271 LLHQDGSKMAVRLAGGLQKMVT---------LLQRNN-VK--FLAIVTDCLQILAYGNQESKLII 323
            .:..|..   :||...|::.:|         :.|.|. ||  |...:...:|:..        |:
Zfish   219 FVDTDSD---IRLVRRLKRDITDRGRDISGVIKQYNKFVKPAFEQYIEPTVQVAD--------IV 272

  Fly   324 LASGGPN----ELV--RIMRSYDYEKLLWTTSRVL---------KVLSVCSSNKPAIVDAGGMQA 373
            :..||.|    :|:  .:....:..||.|..|.:.         |.|||..|..         |.
Zfish   273 VPRGGENFVALDLIVQHVHSQLEKRKLRWDISALASAHQGQPLPKTLSVMESTP---------QV 328

  Fly   374 LAMHLGNMSPRLVQNCLWTLRNLSDAATKV-----EGLEALLQSLVQVLGSTDVNVVTCAAGILS 433
            ..||.             .:||...:..:.     ..:..|::..:..|....|.|.|....:..
Zfish   329 RGMHT-------------IIRNKETSRDEFIFYSKRLMRLLIEHALSFLPLKPVTVETPQGTVYE 380

  Fly   434 NLTCNNQRNKATVCQVGGVDALVRTIINAGDREEITEPAVCALRHLTSRHVDSELAQNAVRLNY 497
            ....:.:|       :.||     :|:.||:..|....|||.         |..|.:..::.|:
Zfish   381 GKRLSGKR-------ITGV-----SILRAGETMEQALMAVCK---------DIRLGKILIQTNH 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
armNP_476665.2 CTNNAbd_dArm 85..159 CDD:439243 15/96 (16%)
Adaptin_N <150..>314 CDD:396262 34/200 (17%)
armadillo repeat 161..186 CDD:293788 4/24 (17%)
armadillo repeat 193..231 CDD:293788 5/47 (11%)
armadillo repeat 238..270 CDD:293788 6/31 (19%)
armadillo repeat 278..314 CDD:293788 10/47 (21%)
armadillo repeat 320..355 CDD:293788 10/49 (20%)
Arm 361..398 CDD:425727 5/36 (14%)
armadillo repeat 362..397 CDD:293788 5/34 (15%)
armadillo repeat 410..435 CDD:293788 4/24 (17%)
Arm 439..481 CDD:425727 10/41 (24%)
armadillo repeat 443..481 CDD:293788 9/37 (24%)
armadillo repeat 490..525 CDD:293788 1/8 (13%)
Arm 597..636 CDD:425727
armadillo repeat 600..636 CDD:293788
armadillo repeat 641..675 CDD:293788
si:ch211-243j20.2XP_021324336.1 UMPK 94..293 CDD:238981 41/236 (17%)
UPRTase 324..527 CDD:434124 24/143 (17%)
Blue background indicates that the domain is not in the aligned region.

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