DRSC/TRiP Functional Genomics Resources

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Protein Alignment arm and si:ch211-243j20.2

DIOPT Version :9

Sequence 1:NP_001259149.1 Gene:arm / 31151 FlyBaseID:FBgn0000117 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_021324336.1 Gene:si:ch211-243j20.2 / 563597 ZFINID:ZDB-GENE-041014-345 Length:542 Species:Danio rerio


Alignment Length:519 Identity:92/519 - (17%)
Similarity:161/519 - (31%) Gaps:193/519 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GKEDEEMEGDPLMFDLDTGFPQNFTQDQVDDMNQQLSQTRSQRVRAAMFPETLEEGIEIPSTQFD 123
            |:|||:.     |...|:|      :|.:|.:         .|.|..:.|            ...
Zfish    18 GEEDEQS-----MSRSDSG------EDSLDGL---------LRNRCPLTP------------SIS 50

  Fly   124 PQQPTAVQRLSEPSQM----------------------LKHA-VVNLINYQDDAELATRAIPELI 165
            |::.|..|..:||..:                      .|.| |:.|..  ..|...|....::|
Zfish    51 PRKRTTSQSKTEPPLLRTNKRTIYTAGRPPWYNVTGTTFKEAFVIGLCG--GSASGKTTVANKII 113

  Fly   166 KLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNS-----P-----QMVAALVRAISNSNDLESTK 220
            :.|:....|::|..:.  :::..|:|...|..|.     |     :::..::|.:.....::   
Zfish   114 EALDVPWVVLLSMDSF--YKVLSKDAQELAAKNEYNFDHPDAFDFELLVTVLRKLKKGKSIK--- 173

  Fly   221 AAVGTLHNLSHHR---------------QGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 270
              |......:|.|               :|:||....    .|:|||...|              
Zfish   174 --VPVYDFTTHSRRKEWKTVYGANVVIFEGILAFANK----ELLKLLDMKV-------------- 218

  Fly   271 LLHQDGSKMAVRLAGGLQKMVT---------LLQRNN-VK--FLAIVTDCLQILAYGNQESKLII 323
            .:..|..   :||...|::.:|         :.|.|. ||  |...:...:|:..        |:
Zfish   219 FVDTDSD---IRLVRRLKRDITDRGRDISGVIKQYNKFVKPAFEQYIEPTVQVAD--------IV 272

  Fly   324 LASGGPN----ELV--RIMRSYDYEKLLWTTSRVL---------KVLSVCSSNKPAIVDAGGMQA 373
            :..||.|    :|:  .:....:..||.|..|.:.         |.|||..|..         |.
Zfish   273 VPRGGENFVALDLIVQHVHSQLEKRKLRWDISALASAHQGQPLPKTLSVMESTP---------QV 328

  Fly   374 LAMHLGNMSPRLVQNCLWTLRNLSDAATKV-----EGLEALLQSLVQVLGSTDVNVVTCAAGILS 433
            ..||.             .:||...:..:.     ..:..|::..:..|....|.|.|....:..
Zfish   329 RGMHT-------------IIRNKETSRDEFIFYSKRLMRLLIEHALSFLPLKPVTVETPQGTVYE 380

  Fly   434 NLTCNNQRNKATVCQVGGVDALVRTIINAGDREEITEPAVCALRHLTSRHVDSELAQNAVRLNY 497
            ....:.:|       :.||     :|:.||:..|....|||.         |..|.:..::.|:
Zfish   381 GKRLSGKR-------ITGV-----SILRAGETMEQALMAVCK---------DIRLGKILIQTNH 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
armNP_001259149.1 Adaptin_N <150..>314 CDD:331138 34/200 (17%)
armadillo repeat 161..186 CDD:293788 4/24 (17%)
armadillo repeat 193..231 CDD:293788 5/47 (11%)
armadillo repeat 238..270 CDD:293788 6/31 (19%)
armadillo repeat 278..314 CDD:293788 10/47 (21%)
armadillo repeat 320..355 CDD:293788 10/49 (20%)
Arm 361..398 CDD:278915 5/36 (14%)
armadillo repeat 362..397 CDD:293788 5/34 (15%)
armadillo repeat 410..435 CDD:293788 4/24 (17%)
Arm 439..481 CDD:278915 10/41 (24%)
armadillo repeat 443..481 CDD:293788 9/37 (24%)
armadillo repeat 490..525 CDD:293788 1/8 (13%)
Arm 597..636 CDD:278915
armadillo repeat 600..636 CDD:293788
armadillo repeat 641..675 CDD:293788
si:ch211-243j20.2XP_021324336.1 UMPK 94..293 CDD:238981 41/236 (17%)
UPRTase 324..527 CDD:317125 24/143 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0572
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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