Sequence 1: | NP_001259149.1 | Gene: | arm / 31151 | FlyBaseID: | FBgn0000117 | Length: | 843 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_690071.3 | Gene: | pkp4 / 561566 | ZFINID: | ZDB-GENE-120411-14 | Length: | 1136 | Species: | Danio rerio |
Alignment Length: | 895 | Identity: | 196/895 - (21%) |
---|---|---|---|
Similarity: | 296/895 - (33%) | Gaps: | 287/895 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 LPPMVSAKEQTLMWQQNSYLGDSGIHSGAVTQVPSL--------------SGKED-EEMEGDPLM 71
Fly 72 F----------------DLDTGFPQNFTQDQVDDMNQQLSQ-TRSQRVRAAMFPETLEEGIEIPS 119
Fly 120 TQFDP--QQPT---------------AVQRLSEPSQMLKHAVVNLINYQDDAELATRAIPELIKL 167
Fly 168 LNDEDQVVVSQAAMMVHQLSKKEAS-RHAIMNSPQMVAALVRAISNSNDLESTKAAVGTLHNLSH 231
Fly 232 HRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQDGSKMAVRLAGGLQKMVTLLQR 296
Fly 297 NNVKFLAIVTDCLQILAYG--NQESKLIILASGGPNELVRIMRSYDYEKLLWTTSRVLKVLSVCS 359
Fly 360 SNKPAIV-DAGGM--------------------QALAMHLGNMSPRLVQNCLWTLRNLSDAATKV 403
Fly 404 EGLEALLQSLVQVLGSTDVNVVTCAAGILSNLTCNNQRNKATVCQVGGVDALVRTIINAGDRE-E 467
Fly 468 ITEPAVCALRHLTSRHVDSELAQNAVRLNYGLSVIVKLLHPP--------SRWPLIKAV------ 518
Fly 519 ------IGLIRNLALCPANHAPLREHGAIHHLVRLLMRAFQDTERQRSSIATTGSQQPSAYADGV 577
Fly 578 RMEEIVEGTVGALHILAR-----ESHNRALIRQQSVIPIFVRLLFNEIENIQRVAAGVLCELAAD 637
Fly 638 KEGAEIIEQEG---------ATGP--LTD--------LLH---SRNEGVATYAAAV-----LFRM 675
Fly 676 SEDKPQDYKKRLSIELTNSLLREDNNIWANADLGM-----GPDLQDMLGPEEAYE-GLYGQGPPS 734
Fly 735 VHSSHGGRAFHQQGYDTLPIDSMQGLEISSPV--GGGGAGGAPGNGGAVG 782 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
arm | NP_001259149.1 | Adaptin_N | <150..>314 | CDD:331138 | 30/164 (18%) |
armadillo repeat | 161..186 | CDD:293788 | 3/24 (13%) | ||
armadillo repeat | 193..231 | CDD:293788 | 9/37 (24%) | ||
armadillo repeat | 238..270 | CDD:293788 | 5/31 (16%) | ||
armadillo repeat | 278..314 | CDD:293788 | 9/35 (26%) | ||
armadillo repeat | 320..355 | CDD:293788 | 10/34 (29%) | ||
Arm | 361..398 | CDD:278915 | 14/57 (25%) | ||
armadillo repeat | 362..397 | CDD:293788 | 13/55 (24%) | ||
armadillo repeat | 410..435 | CDD:293788 | 3/24 (13%) | ||
Arm | 439..481 | CDD:278915 | 10/42 (24%) | ||
armadillo repeat | 443..481 | CDD:293788 | 10/38 (26%) | ||
armadillo repeat | 490..525 | CDD:293788 | 12/54 (22%) | ||
Arm | 597..636 | CDD:278915 | 11/38 (29%) | ||
armadillo repeat | 600..636 | CDD:293788 | 10/35 (29%) | ||
armadillo repeat | 641..675 | CDD:293788 | 14/60 (23%) | ||
pkp4 | XP_690071.3 | DUF966 | <105..>252 | CDD:283735 | |
ARM | 469..591 | CDD:237987 | 28/121 (23%) | ||
armadillo repeat | 477..502 | CDD:293788 | 5/24 (21%) | ||
HEAT_2 | 506..580 | CDD:290374 | 19/73 (26%) | ||
armadillo repeat | 510..546 | CDD:293788 | 9/35 (26%) | ||
armadillo repeat | 554..589 | CDD:293788 | 10/34 (29%) | ||
armadillo repeat | 595..647 | CDD:293788 | 12/55 (22%) | ||
ARM | 636..>699 | CDD:237987 | 24/97 (25%) | ||
armadillo repeat | 765..802 | CDD:293788 | 10/62 (16%) | ||
ARM | 766..893 | CDD:237987 | 31/152 (20%) | ||
armadillo repeat | 812..846 | CDD:293788 | 10/33 (30%) | ||
armadillo repeat | 853..893 | CDD:293788 | 8/39 (21%) | ||
armadillo repeat | 899..934 | CDD:293788 | 6/38 (16%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2332 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |