DRSC/TRiP Functional Genomics Resources

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Protein Alignment arm and Ankar

DIOPT Version :9

Sequence 1:NP_001259149.1 Gene:arm / 31151 FlyBaseID:FBgn0000117 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_795954.2 Gene:Ankar / 319695 MGIID:2442559 Length:1465 Species:Mus musculus


Alignment Length:786 Identity:161/786 - (20%)
Similarity:276/786 - (35%) Gaps:216/786 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 AMFPETLEEGIEIPSTQFDPQQPTAVQRLS-EPSQMLKHAVVNLINYQDDAELATRAIPELIKLL 168
            |...|.|:..||:...:. |...|.|:.|. |.|:....||::|               |:|.|.
Mouse   695 AFHTEVLKYIIELNIPEL-PVWETLVEMLQCESSKRRMMAVMSL---------------EVICLA 743

  Fly   169 NDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVRAISNSNDLESTKAAVGTLHNLSHHR 233
            ||.....:..|.                     .:.|||..: .|..::.....||.|.|:|.|.
Mouse   744 NDRYWQCILDAG---------------------TIPALVNLL-KSPQIKLQYKTVGLLSNISTHV 786

  Fly   234 QGLLAIFKSGGIPALVKLLSSPVE------SVLFYAITTLHNLLLHQDGSKMAVRLAGGLQKMVT 292
            ..:.||.::|||||::.||:|...      :::.|.:....|        |..:....|:..::.
Mouse   787 SIVHAIVEAGGIPAVINLLTSDEPELHSRCAIILYDVAKCEN--------KDVIAKYSGIPALIN 843

  Fly   293 LLQRNNVKFLAIVTDCLQILAYGNQESKLIILASGGPNELVRIMRSYDYEKLLWTTSRVLKVLS- 356
            ||..|....|..|.:|:::|..||:.::..:..:.|...|::.:.|         .|.|||.|| 
Mouse   844 LLSLNKESVLVNVMNCIRVLCMGNESNQQSMKDNNGIQYLIQFLSS---------DSDVLKALSS 899

  Fly   357 -----VCSSNK---PAIVDAG----------GMQALAMHLGNMSPRLVQNC-------------- 389
                 |...||   .||...|          |.|......|.|:...:.||              
Mouse   900 ATIAEVARDNKEVQDAIAKEGAIPPLVTLFKGKQLSVQVKGAMAVESLANCNPLIQKEFLERELT 964

  Fly   390 ---------------------LWTLRNLSDAATKVEGLEALLQSLVQVLGSTDVNVVTCAAGILS 433
                                 ||.|...:....|....:.....::.:|.|....:.......:.
Mouse   965 KDLLKLLQAFQIDVKEQGAIALWALAGQTLKQQKYMAEQIGYNLIISMLLSPSAKMQYVGGEAVI 1029

  Fly   434 NLTCNNQRNKATVCQVGGVDALVRTI-INAGDREEITEPAVCA-LRHLTS-----RHVDSELAQN 491
            .|:.:::.::..:|:..|:..|||.: ||     :|.|..:.: :|.:.|     .|..:.::|.
Mouse  1030 ALSKDSRMHQNQICEGKGIAPLVRLLRIN-----KIPEGTLLSVIRAVGSICIGVAHTSNPMSQQ 1089

  Fly   492 AVRLNYGLSVIVKLLHPPSRWPLIKAVIGLIRNLALCPANHAPLR---------EHGAIHHLVR- 546
            .|.....|.|:::||.   ..|.|...:.:..:||.....:..|:         |:..:.:|:. 
Mouse  1090 FVVEENALPVLIQLLR---NHPSINIRVEVAFSLACIVLGNNSLKKELQNDEGFEYSDVLYLLHS 1151

  Fly   547 ------------LLMRAFQDTERQRSSIATTGSQQPSAYADGVRMEEIVEGTVGALHILARESHN 599
                        |.:.||.| ..|:..|..||....|.:...::.....|..:.|..|       
Mouse  1152 KDKEVCLKAGYALTLFAFND-RFQQHLILETGLITVSIFEPFLQSSVETERAMAAFQI------- 1208

  Fly   600 RALIRQQSVIPI--------FVRLLFNEIENIQ----RVAAGVLCELAADKEG-AEIIEQEGATG 651
              :|..:::|.:        .:::|.:.:.::.    .:...::..||..:.| .|.....|...
Mouse  1209 --IILAKAIIDVEHVTLYGRGIQILADSLNSVHAPTIALTGNIIASLAHSRAGIPEAFVSLGTVQ 1271

  Fly   652 PLTDLLHSRNEGVATYAAAVL---------FRM----SEDKPQDYKKRLSIELTNSLLREDNNIW 703
            .|...|::|:|.|.|..:..|         ||:    ..:||            |..||..||| 
Mouse  1272 RLCYHLYARSEEVRTACSCALGYLTYNAHAFRLLLTECRNKP------------NQFLRITNNI- 1323

  Fly   704 ANADLGMGP------DLQDMLG-PEEAYEGLYGQGPPSVHSSHGGRAFHQQGYDTLP-IDSMQGL 760
             :.|..:.|      .||..:| |..:.|  ...|||.:.....|:...|:   |.| |.....|
Mouse  1324 -SKDAKINPAFLKEFQLQQRMGLPSLSLE--RNGGPPVIPVFKKGKEHRQK---TRPKIQPRDSL 1382

  Fly   761 EISSPV 766
            .:..||
Mouse  1383 TLLPPV 1388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
armNP_001259149.1 Adaptin_N <150..>314 CDD:331138 37/169 (22%)
armadillo repeat 161..186 CDD:293788 6/24 (25%)
armadillo repeat 193..231 CDD:293788 8/37 (22%)
armadillo repeat 238..270 CDD:293788 11/37 (30%)
armadillo repeat 278..314 CDD:293788 9/35 (26%)
armadillo repeat 320..355 CDD:293788 7/34 (21%)
Arm 361..398 CDD:278915 14/84 (17%)
armadillo repeat 362..397 CDD:293788 13/82 (16%)
armadillo repeat 410..435 CDD:293788 2/24 (8%)
Arm 439..481 CDD:278915 10/43 (23%)
armadillo repeat 443..481 CDD:293788 10/39 (26%)
armadillo repeat 490..525 CDD:293788 8/34 (24%)
Arm 597..636 CDD:278915 4/50 (8%)
armadillo repeat 600..636 CDD:293788 4/47 (9%)
armadillo repeat 641..675 CDD:293788 10/42 (24%)
AnkarNP_795954.2 ANK 1 532..561
ANK repeat 537..580 CDD:293786
ANK 581..705 CDD:238125 3/9 (33%)
ANK repeat 582..613 CDD:293786
ANK 2 582..611
Ank_2 587..682 CDD:289560
ANK repeat 615..649 CDD:293786
ANK 3 615..644
ANK 4 651..680
ANK repeat 651..676 CDD:293786
ANK 5 684..714 5/19 (26%)
ARM 1 745..784 10/60 (17%)
armadillo repeat 750..782 CDD:293788 8/53 (15%)
ARM 751..864 CDD:237987 31/142 (22%)
ARM 2 786..825 11/38 (29%)
armadillo repeat 789..824 CDD:293788 11/34 (32%)
ARM 3 827..865 10/45 (22%)
armadillo repeat 829..863 CDD:293788 8/33 (24%)
ARM 830..937 CDD:237987 27/115 (23%)
ARM 4 868..907 10/47 (21%)
armadillo repeat 871..900 CDD:293788 9/37 (24%)
ARM 5 910..949 8/38 (21%)
ARM 914..1023 CDD:237987 15/108 (14%)
armadillo repeat 955..989 CDD:293788 2/33 (6%)
armadillo repeat 1039..1077 CDD:293788 11/42 (26%)
ARM 6 1085..1125 10/42 (24%)
armadillo repeat 1088..1123 CDD:293788 10/37 (27%)
ARM 1089..>1185 CDD:237987 20/99 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1431..1465
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847100
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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