DRSC/TRiP Functional Genomics Resources

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Protein Alignment arm and Jup

DIOPT Version :10

Sequence 1:NP_476665.2 Gene:arm / 31151 FlyBaseID:FBgn0000117 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_034723.1 Gene:Jup / 16480 MGIID:96650 Length:745 Species:Mus musculus


Alignment Length:707 Identity:452/707 - (63%)
Similarity:546/707 - (77%) Gaps:20/707 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 WQQNSYLGDSGIHSGAVTQVPSLSGK---EDEEMEGDPLMFDLDTGFPQNFTQDQVDDMNQQLSQ 96
            ||| :|..|||||||..|.|||:|.|   ::::..|........|.:.|...|:| .|:..|:|.
Mouse    16 WQQ-TYTYDSGIHSGVNTCVPSVSSKGIMDEDDACGRQYTLKKTTTYTQGVPQNQ-GDLEYQMST 78

  Fly    97 T-RSQRVRAAMFPETL-EEGIEIPSTQFDPQQPTAVQRLSEPSQMLKHAVVNLINYQDDAELATR 159
            | |::|||.||.|... |:...:.:||.: .|.|.:|||:||||:||.|:|:|||||||||||||
Mouse    79 TARAKRVREAMCPGVSGEDSSLLLATQVE-GQTTNLQRLAEPSQLLKSAIVHLINYQDDAELATR 142

  Fly   160 AIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVRAISNSNDLESTKAAVG 224
            |:|||.|||||||.|||::|||:|:|||||||||.|:|.|||:|||:||.:.|::||::.:....
Mouse   143 ALPELTKLLNDEDPVVVTKAAMIVNQLSKKEASRRALMGSPQLVAAVVRTMQNTSDLDTARCTTS 207

  Fly   225 TLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQDGSKMAVRLAGGLQK 289
            .||||||||:|||||||||||||||::|||||||||||||||||||||:|:|:|||||||.||||
Mouse   208 ILHNLSHHREGLLAIFKSGGIPALVRMLSSPVESVLFYAITTLHNLLLYQEGAKMAVRLADGLQK 272

  Fly   290 MVTLLQRNNVKFLAIVTDCLQILAYGNQESKLIILASGGPNELVRIMRSYDYEKLLWTTSRVLKV 354
            ||.||.:||.|||||.|||||:||||||||||||||:|||..||:|||:|.||||||||||||||
Mouse   273 MVPLLNKNNPKFLAITTDCLQLLAYGNQESKLIILANGGPQGLVQIMRNYSYEKLLWTTSRVLKV 337

  Fly   355 LSVCSSNKPAIVDAGGMQALAMHLGNMSPRLVQNCLWTLRNLSDAATKVEGLEALLQSLVQVLGS 419
            ||||.|||||||:|||||||..||.:.|||||||||||||||||.|||.||||::|:.||..|..
Mouse   338 LSVCPSNKPAIVEAGGMQALGKHLTSNSPRLVQNCLWTLRNLSDVATKQEGLESVLKILVNQLSV 402

  Fly   420 TDVNVVTCAAGILSNLTCNNQRNKATVCQVGGVDALVRTIINAGDREEITEPAVCALRHLTSRHV 484
            .||||:|||.|.||||||||.:||..|.|..||:||:..|:.|||:::||||||||||||||||.
Mouse   403 DDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILRAGDKDDITEPAVCALRHLTSRHP 467

  Fly   485 DSELAQNAVRLNYGLSVIVKLLHPPSRWPLIKAVIGLIRNLALCPANHAPLREHGAIHHLVRLLM 549
            ::|:|||:||||||:..|||||:.|::|||:||.|||||||||||||||||:|...|..||:||:
Mouse   468 EAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLVQLLV 532

  Fly   550 RAFQDTERQRSSIATTGSQQPSAYADGVRMEEIVEGTVGALHILARESHNRALIRQQSVIPIFVR 614
            :|.||.:|.    ...|:|||  |.|||||||||||..||||||||:..||..|.:.:.||:||:
Mouse   533 KAHQDAQRH----VAAGTQQP--YTDGVRMEEIVEGCTGALHILARDPMNRMEIFRLNTIPLFVQ 591

  Fly   615 LLFNEIENIQRVAAGVLCELAADKEGAEIIEQEGATGPLTDLLHSRNEGVATYAAAVLFRMSEDK 679
            ||::.:|||||||||||||||.|||.|:.|:.|||:.||.:||||||||.||||||||||:||||
Mouse   592 LLYSSVENIQRVAAGVLCELAQDKEAADAIDAEGASAPLMELLHSRNEGTATYAAAVLFRISEDK 656

  Fly   680 PQDYKKRLSIELTNSLLREDNNIWANADLGM---GPDLQDMLGPEEAYEGLYGQGPP 733
            ..||:||:|:||||||.:.|...|..|...:   .|...||   :..|..:|....|
Mouse   657 NPDYRKRVSVELTNSLFKHDPAAWEAAQSMIPINEPYADDM---DATYRPMYSSDVP 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
armNP_476665.2 CTNNAbd_dArm 85..159 CDD:439243 39/75 (52%)
Adaptin_N <150..>314 CDD:396262 124/163 (76%)
armadillo repeat 161..186 CDD:293788 17/24 (71%)
armadillo repeat 193..231 CDD:293788 18/37 (49%)
armadillo repeat 238..270 CDD:293788 29/31 (94%)
armadillo repeat 278..314 CDD:293788 28/35 (80%)
armadillo repeat 320..355 CDD:293788 28/34 (82%)
Arm 361..398 CDD:425727 30/36 (83%)
armadillo repeat 362..397 CDD:293788 28/34 (82%)
armadillo repeat 410..435 CDD:293788 14/24 (58%)
Arm 439..481 CDD:425727 25/41 (61%)
armadillo repeat 443..481 CDD:293788 23/37 (62%)
armadillo repeat 490..525 CDD:293788 24/34 (71%)
Arm 597..636 CDD:425727 23/38 (61%)
armadillo repeat 600..636 CDD:293788 22/35 (63%)
armadillo repeat 641..675 CDD:293788 24/33 (73%)
JupNP_034723.1 CTNNAbd_CTNNB1-like 73..142 CDD:459249 37/69 (54%)
Adaptin_N <120..>289 CDD:396262 127/168 (76%)
Interaction with DSC1 and DSG1. /evidence=ECO:0000250 132..297 125/164 (76%)
armadillo repeat 144..169 CDD:293788 17/24 (71%)
armadillo repeat 186..212 CDD:293788 10/25 (40%)
armadillo repeat 221..253 CDD:293788 29/31 (94%)
Arm 221..253 CDD:425727 29/31 (94%)
armadillo repeat 261..297 CDD:293788 28/35 (80%)
ARM 5 298..341 36/42 (86%)
armadillo repeat 305..338 CDD:293788 26/32 (81%)
PLN03200 <328..>658 CDD:215629 230/335 (69%)
ARM 341..381 CDD:214547 32/39 (82%)
ARM 6 342..381 31/38 (82%)
armadillo repeat 345..380 CDD:293788 28/34 (82%)
ARM 7 383..420 23/36 (64%)
armadillo repeat 393..418 CDD:293788 14/24 (58%)
ARM 8 423..464 24/40 (60%)
armadillo repeat 426..464 CDD:293788 23/37 (62%)
ARM 9 470..510 28/39 (72%)
armadillo repeat 470..508 CDD:293788 26/37 (70%)
ARM 10 512..551 21/44 (48%)
armadillo repeat 515..572 CDD:293788 36/62 (58%)
Interaction with DSC1. /evidence=ECO:0000250 574..661 57/86 (66%)
armadillo repeat 577..611 CDD:293788 20/33 (61%)
armadillo repeat 618..652 CDD:293788 24/33 (73%)

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