DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment arm and ankar

DIOPT Version :9

Sequence 1:NP_001259149.1 Gene:arm / 31151 FlyBaseID:FBgn0000117 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_031749763.1 Gene:ankar / 100496722 XenbaseID:XB-GENE-1010351 Length:1400 Species:Xenopus tropicalis


Alignment Length:807 Identity:151/807 - (18%)
Similarity:279/807 - (34%) Gaps:225/807 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DLPPMVSAKE---QTLMWQQNSYLGDSGIHSGAVTQVPSLSGKEDEEMEGDPLMFDLDTGFPQNF 82
            :|||::..:.   |...:.:|.|.   .:|.|                    :.|||.|...:..
 Frog   355 ELPPLMLGENFACQHFQYGENEYF---HLHGG--------------------IEFDLGTPSLEQP 396

  Fly    83 TQDQVDDMNQQLSQTRSQRVRAAM-FPETLEEGIEIPSTQFDPQQPTAVQRLSE---PSQMLKH- 142
            .:| :....|.:..|..:.:...: ...|..|...||:...:.:....:....|   |:.:..| 
 Frog   397 CED-IKAAFQDIKITAIKHINDLLDLDTTYREYYPIPTVTINGKSYYTIAIQLENFYPAGLKTHW 460

  Fly   143 --AVVNLINYQDDAELATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAI--MNSP--- 200
              |:..:|     :.|..:.:|     |.|         ..|..|..|:...:.||  .|.|   
 Frog   461 WGAINGII-----STLKPKRLP-----LTD---------VQMYEQFKKRFGYKRAIKCQNFPFGL 506

  Fly   201 -----QMVAALVRAISNSNDLES----TKAAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPV 256
                 :.:||:....|....:..    .:|....:|:.:.:.:   .:..|....|...|.....
 Frog   507 KSAAKRGLAAVFHTFSRKTQISGLDVRDEAGYAVIHHAAIYNR---VVIVSQLAKASFNLNQRRN 568

  Fly   257 ESVLFYAITTLHNLLLHQDGSKMAVRLA---GGLQKMVTLLQ-------RNNVKFLAI------- 304
            :|.|..|.|:..||...:.....|:.:|   |.|:.::.||.       |:|..::||       
 Frog   569 DSFLVQANTSTQNLEDIEQSGPTALHIAAQCGSLEVLLCLLALKTDYMLRDNRGWMAIHFAAFYG 633

  Fly   305 VTDCLQILAYGN-------------QESKLIILASGGP----NELVRIMRSYDYEKLLWTTSRVL 352
            ...|::.| |.|             |.:.|::.|:.|.    :.|:.:..::..:..|......|
 Frog   634 AIPCIRAL-YRNDPNLLEMETTAQYQCTPLLLTAAAGELDALHYLLSVGANWKQKDSLGNNIIDL 697

  Fly   353 KVLSVCSSNKPAIVD------------AGGMQALAMHLGNMSPRLVQNCLWTLRNLSDAATKVEG 405
            .||...::....|:|            ||.::....|...|:.|.::......||..:...|.  
 Frog   698 AVLYFHTNILKYIIDLNIPELHVWQQLAGLLKCDDQHRKEMAVRCLEVLCVVNRNYWEDIYKA-- 760

  Fly   406 LEALLQSLVQVLGSTDVNVVTCAAGILSNLTCNNQRNKATVCQVGGVDALVRTIINAGDREEITE 470
              ..:.|||::|.|..|.:...|.|||||::.||              .:.|.::.:|       
 Frog   761 --GTIPSLVELLHSDQVPLKCLALGILSNISNNN--------------PVSRALVKSG------- 802

  Fly   471 PAVCALRHLTSRHVDSELAQNAVRLNYGLSVIVKLLHPPSRWPLIKAVIG-LIRNLALCPANHAP 534
                                       .:.|:|.|||  ||.|.:::... |:.::|...:|...
 Frog   803 ---------------------------AIQVLVHLLH--SRQPELQSRCSVLLSDIAQIDSNQNV 838

  Fly   535 LREHGAIHHLVRLLMRAFQDTERQRSSIATTGSQQPSAYADGVRMEEIVEGTVGALHILA-RESH 598
            :.|...|..||.||...::|                           ::...|..:.:|. :.:.
 Frog   839 IAEMDGISPLVHLLYEKYED---------------------------VLVNAVNCIRVLCIKNTA 876

  Fly   599 NRALIRQQSVIPIFVRLLFNEIENIQRVAAGVLCELAADKEG-AEIIEQEGATGPLTDLLHSRNE 662
            |:..:|....||..|..|..:.:.:...|..|:.|||.|.:. .:.:.:||....|..:|..||.
 Frog   877 NQKAVRDLGAIPSLVEFLTAKSDILVSAATDVIAELARDNKAIQDAVTKEGVIESLISILRVRNI 941

  Fly   663 GVATYAAAVLFRMSEDKPQDYKKRLSIELTNSL----------LREDNN--IWANAD-------- 707
            .:...||..:..:.:..|...|:.|:..:|..:          :||..:  :||.|.        
 Frog   942 NIQVKAAMTIEALCDHNPAVQKEFLTKSVTKHISKLLKVFQLEVREQGSTTLWALAGQTRKQQKA 1006

  Fly   708 ----LGMGPDLQDMLGPEEAYEGLYGQ 730
                :|....:..:|.|.:..:.:.|:
 Frog  1007 MAEYIGYKCIIDMLLSPSDKMQYIGGE 1033

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
armNP_001259149.1 Adaptin_N <150..>314 CDD:331138 37/194 (19%)
armadillo repeat 161..186 CDD:293788 4/24 (17%)
armadillo repeat 193..231 CDD:293788 9/51 (18%)
armadillo repeat 238..270 CDD:293788 7/31 (23%)
armadillo repeat 278..314 CDD:293788 12/52 (23%)
armadillo repeat 320..355 CDD:293788 6/38 (16%)
Arm 361..398 CDD:278915 9/48 (19%)
armadillo repeat 362..397 CDD:293788 9/46 (20%)
armadillo repeat 410..435 CDD:293788 11/24 (46%)
Arm 439..481 CDD:278915 3/41 (7%)
armadillo repeat 443..481 CDD:293788 2/37 (5%)
armadillo repeat 490..525 CDD:293788 9/35 (26%)
Arm 597..636 CDD:278915 10/38 (26%)
armadillo repeat 600..636 CDD:293788 9/35 (26%)
armadillo repeat 641..675 CDD:293788 8/33 (24%)
ankarXP_031749763.1 ANKYR <530..641 CDD:223738 22/113 (19%)
ANK repeat 537..586 CDD:293786 10/51 (20%)
Ank_2 593..688 CDD:403870 18/95 (19%)
ANK repeat 621..655 CDD:293786 6/34 (18%)
ANK repeat 657..688 CDD:293786 5/30 (17%)
PLN03200 <722..>1011 CDD:215629 73/369 (20%)
armadillo repeat 722..746 CDD:293788 5/23 (22%)
armadillo repeat 756..788 CDD:293788 12/35 (34%)
armadillo repeat 796..831 CDD:293788 11/70 (16%)
armadillo repeat 836..870 CDD:293788 8/60 (13%)
armadillo repeat 878..912 CDD:293788 7/33 (21%)
armadillo repeat 920..954 CDD:293788 8/33 (24%)
armadillo repeat 962..996 CDD:293788 6/33 (18%)
armadillo repeat 1014..1038 CDD:293788 3/20 (15%)
armadillo repeat 1046..1084 CDD:293788
armadillo repeat 1095..1130 CDD:293788
armadillo repeat 1185..1218 CDD:293788
armadillo repeat 1235..1260 CDD:293788
armadillo repeat 1268..1304 CDD:293788
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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