DRSC/TRiP Functional Genomics Resources

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Protein Alignment arm and atcayb

DIOPT Version :10

Sequence 1:NP_476665.2 Gene:arm / 31151 FlyBaseID:FBgn0000117 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_021323986.2 Gene:atcayb / 100329872 ZFINID:ZDB-GENE-070912-220 Length:339 Species:Danio rerio


Alignment Length:346 Identity:65/346 - (18%)
Similarity:122/346 - (35%) Gaps:121/346 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 EDEEMEGD---PLMFDLD-TGFPQN-----FTQDQVDDMNQQ----------LSQTRSQ-RVRAA 105
            :||..:.|   ||..|.| .|...|     .|.|.:|.:.|:          ||..:|: .|.:.
Zfish    16 KDEWQDDDFPRPLPEDGDLDGLTDNSHHGALTADHLDSVRQKRRTLIAPDINLSLDKSEGSVLSD 80

  Fly   106 MFPETLE------EGIEIP----------STQFDPQQPTAVQRLSEPSQMLKHAVVNLINYQDDA 154
            .|.||.:      :.||.|          .|:.:.:..|.|.....|.             .||.
Zfish    81 DFLETPDDLDINVDDIETPDDDSLGSANNGTELEWEDDTPVASAKGPG-------------GDDG 132

  Fly   155 ELATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVRAISNSNDLEST 219
            :...|....:|  :.|::           |::..            |::...:|.:::.      
Zfish   133 DGTGRLWRSVI--IGDQE-----------HRIDM------------QVIRPYLRVVTHG------ 166

  Fly   220 KAAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSP-------VESVLFYAITTLHNL------L 271
                      .::.:||.||.    :.|...|..|.       :|::..|.|::|..|      :
Zfish   167 ----------GYYGEGLNAII----VFAACYLPDSGCADYNYIMENLFLYVISSLEALVAEDYMI 217

  Fly   272 LHQDGSKMAVRLAG--GLQKMVTLLQ---RNNVKFLAIVTDCLQILAYGNQESKLIILASGGPNE 331
            ::.:|:....|:.|  .|::...:::   |.|:|       || |:|:.....: .:||...|..
Zfish   218 IYLNGATPRRRMPGISWLKRCYQMIERRLRKNLK-------CL-IIAHPTWFIR-TVLAISRPFV 273

  Fly   332 LVRIMRSYDYEKLLWTTSRVL 352
            .|:.|....|.:.|...::::
Zfish   274 NVKFMDKIRYVQSLQELAQIV 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
armNP_476665.2 CTNNAbd_dArm 85..159 CDD:439243 19/100 (19%)
Adaptin_N <150..>314 CDD:396262 30/181 (17%)
armadillo repeat 161..186 CDD:293788 3/24 (13%)
armadillo repeat 193..231 CDD:293788 2/37 (5%)
armadillo repeat 238..270 CDD:293788 9/38 (24%)
armadillo repeat 278..314 CDD:293788 9/40 (23%)
armadillo repeat 320..355 CDD:293788 7/33 (21%)
Arm 361..398 CDD:425727
armadillo repeat 362..397 CDD:293788
armadillo repeat 410..435 CDD:293788
Arm 439..481 CDD:425727
armadillo repeat 443..481 CDD:293788
armadillo repeat 490..525 CDD:293788
Arm 597..636 CDD:425727
armadillo repeat 600..636 CDD:293788
armadillo repeat 641..675 CDD:293788
atcaybXP_021323986.2 None
Blue background indicates that the domain is not in the aligned region.

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