DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL16 and SIL1

DIOPT Version :9

Sequence 1:NP_001259148.1 Gene:mRpL16 / 31150 FlyBaseID:FBgn0023519 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_014611.1 Gene:SIL1 / 854126 SGDID:S000005391 Length:421 Species:Saccharomyces cerevisiae


Alignment Length:200 Identity:41/200 - (20%)
Similarity:75/200 - (37%) Gaps:46/200 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 EMVHNTLLHKQYAIVATGGGRLRWGHYEMMRLTIGRKMNV-NTMFATWRVPA-PWQPITKKGQGQ 139
            ::|.:|:||.....|.:||..:.....:.:.:: |..:.| |..:.....|. .||||.   .||
Yeast    15 KLVASTILHSSIHSVPSGGEIISAEDLKELEIS-GNSICVDNRCYPKIFEPRHDWQPIL---PGQ 75

  Fly   140 RMGGGKGAIDHYVTPIKAGRV----IVEIAGKCEFV-------------EVKQFLQQVANQLPFQ 187
            .:.||.....:..|.:|..::    .|...|..|.:             |.....:::.|.:...
Yeast    76 ELPGGLDIRINMDTGLKEAKLNDEKNVGDNGSHELIVSSEDMKASPGDYEFSSDFKEMRNIIDSN 140

  Fly   188 ATVVSQEM--LDE--QRVAEEEQTRQ------------------NEN-PFTMKYVIQNNLSGCHR 229
            .|:.||::  |::  .|:.|.....:                  ||| |.|::.:....::.|.|
Yeast   141 PTLSSQDIARLEDSFDRIMEFAHDYKHGYKIITHEFALLANLSLNENLPLTLRELSTRVITSCLR 205

  Fly   230 WLSPV 234
            ...||
Yeast   206 NNPPV 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL16NP_001259148.1 Ribosomal_L16 64..184 CDD:278672 26/125 (21%)
SIL1NP_014611.1 SIL1 123..421 CDD:407047 16/87 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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