DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL16 and mrpl16

DIOPT Version :9

Sequence 1:NP_001259148.1 Gene:mRpL16 / 31150 FlyBaseID:FBgn0023519 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_001017058.1 Gene:mrpl16 / 549812 XenbaseID:XB-GENE-5836490 Length:253 Species:Xenopus tropicalis


Alignment Length:248 Identity:108/248 - (43%)
Similarity:152/248 - (61%) Gaps:12/248 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLSLKL--VSQLFKQS-LASGNMAIVNTAGLKYFAPPIKYQNVEQPERPKLRVIERQPQLPPNIR 62
            :||.|:  |.:||... |.:.:.|:  |.||:.|..|..|..|...:|||||.:.:.|.|   ::
 Frog     4 VLSSKVNGVGRLFLSGWLPNAHRAV--TVGLRTFDIPPDYSGVSLKDRPKLRFVNKVPDL---VK 63

  Fly    63 PPKMQKRLRYMRGPEMVHNTLLHKQYAIVATGGGRLRWGHYEMMRLTIGRKMNVNTMFATWRVPA 127
            ..|..|.|:.:|||..........:|.|||.|||.|.||||||||||:.|.::..|.|:.|.|..
 Frog    64 VKKEPKNLKDIRGPAKEGREFEEGEYGIVALGGGYLHWGHYEMMRLTLNRTLSPRTTFSRWLVAP 128

  Fly   128 PWQPITKKGQGQRMGGGKGAIDHYVTPIKAGRVIVEIAGKCEFVEVKQFLQQVANQLPFQATVVS 192
            |.:|:|:||.||||||||||:||||||:||.::|:|:.|:|||.||:..|.|||.:|||.|..||
 Frog   129 PHKPVTRKGLGQRMGGGKGAVDHYVTPVKADQLILEVGGRCEFQEVQPILSQVAKKLPFPAQAVS 193

  Fly   193 QEMLDEQRVAEEEQTRQNENPFTMKYVIQNNLSGCHRWLSPVD----HKWFGK 241
            ::.|.:.|...||:...|:||:|...:...|:.||.:|:|..|    .:::||
 Frog   194 KDSLKKVRQEAEEKELNNQNPWTFTRLATRNMMGCRKWISAFDVQNKGRYWGK 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL16NP_001259148.1 Ribosomal_L16 64..184 CDD:278672 64/119 (54%)
mrpl16NP_001017058.1 Ribosomal_L16 63..185 CDD:278672 64/121 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 148 1.000 Domainoid score I4461
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H9872
Inparanoid 1 1.050 200 1.000 Inparanoid score I3669
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1420525at2759
OrthoFinder 1 1.000 - - FOG0002930
OrthoInspector 1 1.000 - - oto104009
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5004
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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