DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL16 and mrpl16

DIOPT Version :10

Sequence 1:NP_525041.1 Gene:mRpL16 / 31150 FlyBaseID:FBgn0023519 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_001007765.2 Gene:mrpl16 / 493604 ZFINID:ZDB-GENE-041122-1 Length:254 Species:Danio rerio


Alignment Length:218 Identity:99/218 - (45%)
Similarity:143/218 - (65%) Gaps:3/218 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 TAGLKYFAPPIKYQNVEQPERPKLRVIERQPQLPPNIRPPKMQKRLRYMRGPEMVHNTLLHKQYA 89
            :||::.:..|..:.:||.||:|||:.:|:.|.|.   :..|..||||.::||..........||.
Zfish    30 SAGMRTYEIPPDFSDVELPEKPKLKFMEKVPNLK---QAKKEMKRLRDIQGPSRTATKFSQGQYG 91

  Fly    90 IVATGGGRLRWGHYEMMRLTIGRKMNVNTMFATWRVPAPWQPITKKGQGQRMGGGKGAIDHYVTP 154
            |:|.|||.|.|||.|||||||.|.::.::|||.||...|.:|||:|..|||||||||||||||||
Zfish    92 ILALGGGFLHWGHIEMMRLTINRSIDPSSMFAVWRFQPPHKPITRKSLGQRMGGGKGAIDHYVTP 156

  Fly   155 IKAGRVIVEIAGKCEFVEVKQFLQQVANQLPFQATVVSQEMLDEQRVAEEEQTRQNENPFTMKYV 219
            ||.||:::|:.|:.|.|:|:..|:|||.:|||.|.|||:|.|........|:...|:||::.:.:
Zfish   157 IKCGRLVLEMGGQLELVQVEAMLKQVAKKLPFPAKVVSRESLALMYKEHAERVSNNQNPWSFQKI 221

  Fly   220 IQNNLSGCHRWLSPVDHKWFGKH 242
            :::|:.|..:.|||:|....|::
Zfish   222 VRSNMLGIRKVLSPLDVHNHGRY 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL16NP_525041.1 Ribosomal_L16 61..191 CDD:459733 70/129 (54%)
mrpl16NP_001007765.2 Ribosomal_L16 66..193 CDD:459733 70/126 (56%)

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