DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL16 and mrpl16

DIOPT Version :9

Sequence 1:NP_001259148.1 Gene:mRpL16 / 31150 FlyBaseID:FBgn0023519 Length:243 Species:Drosophila melanogaster
Sequence 2:XP_005168058.1 Gene:mrpl16 / 493604 ZFINID:ZDB-GENE-041122-1 Length:254 Species:Danio rerio


Alignment Length:218 Identity:99/218 - (45%)
Similarity:143/218 - (65%) Gaps:3/218 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 TAGLKYFAPPIKYQNVEQPERPKLRVIERQPQLPPNIRPPKMQKRLRYMRGPEMVHNTLLHKQYA 89
            :||::.:..|..:.:||.||:|||:.:|:.|.|.   :..|..||||.::||..........||.
Zfish    30 SAGMRTYEIPPDFSDVELPEKPKLKFMEKVPNLK---QAKKEMKRLRDIQGPSRTATKFSQGQYG 91

  Fly    90 IVATGGGRLRWGHYEMMRLTIGRKMNVNTMFATWRVPAPWQPITKKGQGQRMGGGKGAIDHYVTP 154
            |:|.|||.|.|||.|||||||.|.::.::|||.||...|.:|||:|..|||||||||||||||||
Zfish    92 ILALGGGFLHWGHIEMMRLTINRSIDPSSMFAVWRFQPPHKPITRKSLGQRMGGGKGAIDHYVTP 156

  Fly   155 IKAGRVIVEIAGKCEFVEVKQFLQQVANQLPFQATVVSQEMLDEQRVAEEEQTRQNENPFTMKYV 219
            ||.||:::|:.|:.|.|:|:..|:|||.:|||.|.|||:|.|........|:...|:||::.:.:
Zfish   157 IKCGRLVLEMGGQLELVQVEAMLKQVAKKLPFPAKVVSRESLALMYKEHAERVSNNQNPWSFQKI 221

  Fly   220 IQNNLSGCHRWLSPVDHKWFGKH 242
            :::|:.|..:.|||:|....|::
Zfish   222 VRSNMLGIRKVLSPLDVHNHGRY 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL16NP_001259148.1 Ribosomal_L16 64..184 CDD:278672 66/119 (55%)
mrpl16XP_005168058.1 Ribosomal_L16_L10e 83..193 CDD:238714 63/109 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581606
Domainoid 1 1.000 150 1.000 Domainoid score I4363
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9872
Inparanoid 1 1.050 199 1.000 Inparanoid score I3762
OMA 1 1.010 - - QHG45726
OrthoDB 1 1.010 - - D1420525at2759
OrthoFinder 1 1.000 - - FOG0002930
OrthoInspector 1 1.000 - - oto40268
orthoMCL 1 0.900 - - OOG6_101573
Panther 1 1.100 - - LDO PTHR12220
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2260
SonicParanoid 1 1.000 - - X5004
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1514.940

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