DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL16 and Mrpl16

DIOPT Version :9

Sequence 1:NP_001259148.1 Gene:mRpL16 / 31150 FlyBaseID:FBgn0023519 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_001009647.1 Gene:Mrpl16 / 293754 RGDID:735195 Length:251 Species:Rattus norvegicus


Alignment Length:225 Identity:110/225 - (48%)
Similarity:150/225 - (66%) Gaps:7/225 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 AIVNTAGLKYFAPPIKYQNVEQPERPKLRVIERQPQLPPNIRPPKMQKRLRYMRGPEMVHNTLLH 85
            |:..:||||...|...::||..|||.||:.:||.|.:|...|.|   |.|:.:|||.........
  Rat    23 ALPTSAGLKTLLPVPTFENVSIPERSKLKFVERVPLVPKVRREP---KNLKDIRGPSAEATDFTE 84

  Fly    86 KQYAIVATGGGRLRWGHYEMMRLTIGRKMNVNTMFATWRVPAPWQPITKKGQGQRMGGGKGAIDH 150
            ..:||:|.|||.|.|||:|||||||.|.|:...|||.||||||::|||:||.|||||||||||||
  Rat    85 GNFAILALGGGYLHWGHFEMMRLTINRFMDPKNMFAIWRVPAPFKPITRKGVGQRMGGGKGAIDH 149

  Fly   151 YVTPIKAGRVIVEIAGKCEFVEVKQFLQQVANQLPFQATVVSQEMLDEQRVAEEEQTRQNENPFT 215
            ||||:|.|.:|||:.|:|||.|||:.|.|||::|||.|..||::.|::....::|:...|:||:|
  Rat   150 YVTPVKTGCLIVEMGGRCEFEEVKRVLNQVAHKLPFPAKAVSRKTLEKMHQNQKERELNNQNPWT 214

  Fly   216 MKYVIQNNLSGCHRWLSPVD----HKWFGK 241
            .:.:...|:.|..::|||.|    .:::||
  Rat   215 FERIATANMFGIRKFLSPYDLTQKGRYWGK 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL16NP_001259148.1 Ribosomal_L16 64..184 CDD:278672 72/119 (61%)
Mrpl16NP_001009647.1 Ribosomal_L16 60..190 CDD:395194 78/132 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341631
Domainoid 1 1.000 159 1.000 Domainoid score I3982
eggNOG 1 0.900 - - E1_COG0197
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9872
Inparanoid 1 1.050 216 1.000 Inparanoid score I3513
OMA 1 1.010 - - QHG45726
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002930
OrthoInspector 1 1.000 - - oto97323
orthoMCL 1 0.900 - - OOG6_101573
Panther 1 1.100 - - LDO PTHR12220
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5004
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.760

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