back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment mRpL16 and AT2G28815

DIOPT Version :10

Sequence 1:	NP_525041.1	Gene:	mRpL16 / 31150	FlyBaseID:	FBgn0023519	Length:	243	Species:	Drosophila melanogaster
Sequence 2:	NP_001325273.1	Gene:	AT2G28815 / 28718313	AraportID:	AT2G28815	Length:	291	Species:	Arabidopsis thaliana

Alignment Length:	162	Identity:	42/162 - (25%)
Similarity:	71/162 - (43%)	Gaps:	27/162 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly    39 NVEQPERPKLRVIERQPQ---------LPPNIRPPKMQKRLRYMRGPEMVHNTLLHKQYAIVA-- 92
            |.::.::.|..|.|::|:         :|   |..|.||..|......:.....:..:||:..
plant   133 NEKKQQKQKSSVNEKKPKKKKKSSISDIP---RRTKFQKHHRGRINKGVSSQGYICSRYALQTLE 194

  Fly    93 ---TGGGRLRWGHYEMMRLTIGRKMNVNT-MFATWRVPAPWQPITKKGQGQRMGGGKGAIDHYVT 153
               ....::..|...|.| .|||.:.|.. :||.       :|:|.:....|||.||||...:|.
plant   195 PAWITSRQIEAGRRAMTR-NIGRGLTVRVHIFAD-------KPVTVRPPETRMGRGKGAPAFWVA 251

  Fly   154 PIKAGRVIVEIAGKCEFVEVKQFLQQVANQLP 185
            .:|.|::|.|:.|..|.| .::.:...|::||
plant   252 VVKPGKIIYEMGGVSEKV-AREAISIAASKLP 282

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.