DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL16 and mrpl-16

DIOPT Version :10

Sequence 1:NP_525041.1 Gene:mRpL16 / 31150 FlyBaseID:FBgn0023519 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_497965.2 Gene:mrpl-16 / 188040 WormBaseID:WBGene00011412 Length:240 Species:Caenorhabditis elegans


Alignment Length:226 Identity:83/226 - (36%)
Similarity:125/226 - (55%) Gaps:13/226 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 TAGLKYFAPPIKYQNVEQPERPKLRVIERQPQLP--------PNIRPPKMQKRLRYMRGPEMVHN 81
            |.|:|.::.|:.|:||..|...:|::    |.:|        ...:..|..||:...||.|.||.
 Worm    19 TRGMKKYSFPVTYENVRFPPNGQLKL----PVMPAEPFYDAEKGEKKYKSTKRMIEARGVEEVHT 79

  Fly    82 TLLHKQYAIVATGGGRLRWGHYEMMRLTIGRKMNVNTMFATWRVPAPWQPITKKGQGQRMGGGKG 146
            .|:|:||.:.|..||.:....::.::..|.:.: ::..|:.|||.|||.|.|||.||.|:|||||
 Worm    80 ELIHEQYGLAAVSGGFIDSDDFKFIQDRINKNL-IDNQFSVWRVDAPWLPRTKKAQGTRLGGGKG 143

  Fly   147 AIDHYVTPIKAGRVIVEIAGKCEFVEVKQFLQQVANQLPFQATVVSQEMLDEQRVAEEEQTRQNE 211
            :|..||||::|.|:|:|:.|....:|.|.||..:..:..|....||:.||.|:|...||:...|:
 Worm   144 SIQKYVTPVRANRIILEVGGHITEIEAKAFLLYLCERFSFPVEFVSETMLAERRKKAEEERAMNK 208

  Fly   212 NPFTMKYVIQNNLSGCHRWLSPVDHKWFGKH 242
            |.|....||:.|:..|:.|||..|..|.||:
 Worm   209 NGFNWGKVIKYNMQNCNSWLSSYDVAWKGKY 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL16NP_525041.1 Ribosomal_L16 61..191 CDD:459733 50/129 (39%)
mrpl-16NP_497965.2 Ribosomal_L16 60..188 CDD:459733 50/128 (39%)

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