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Protein Alignment HLA-DPB1 and DIP-alpha

DIOPT Version :9

Sequence 1:	NP_002112.3	Gene:	HLA-DPB1 / 3115	HGNCID:	4940	Length:	258	Species:	Homo sapiens
Sequence 2:	NP_001259218.1	Gene:	DIP-alpha / 31322	FlyBaseID:	FBgn0052791	Length:	554	Species:	Drosophila melanogaster

Alignment Length:	143	Identity:	30/143 - (20%)
Similarity:	56/143 - (39%)	Gaps:	39/143 - (27%)

- Green bases have known domain annotations that are detailed below.

Human   113 GGPMTLQRRVQPRVNVSPSKKGPLQHHNLLV-----------CHVTDFYPGSIQVRWFLNGQEET 166
            |.|.::.:|:...::..|    .:|..|.||           ||| :..|.||.. |.    ::|
  Fly   227 GVPPSVSKRISLSIHFHP----VIQVPNQLVGAPLGTDVQIECHV-EASPKSINY-WI----KDT 281

Human   167 AGVVSTNLIRNGDWTFQ---------ILVMLEMTPQQGDV--YTCQVEHT--SLDSPVTVEWKAQ 218
            ..::.|    :|.:..|         .:.|:....|:.||  |.|..:::  .:||.:.: ::..
  Fly   282 GEMIVT----SGKYHVQESSQSMYETKMSMIVRKFQKDDVGSYRCIAKNSLGEVDSSIRL-YEIP 341

Human   219 SDSARSKTLTGAG 231
            ..:.....|.|.|
  Fly   342 GPNRNKNPLNGGG 354

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.