DRSC/TRiP Functional Genomics Resources

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Protein Alignment trr and SET1

DIOPT Version :9

Sequence 1:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster
Sequence 2:NP_011987.1 Gene:SET1 / 856519 SGDID:S000001161 Length:1080 Species:Saccharomyces cerevisiae


Alignment Length:330 Identity:103/330 - (31%)
Similarity:154/330 - (46%) Gaps:74/330 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  2172 FPQHISGEDL-FGLTEPAIVRILESL---------PGIETLTDYRFKYGRNPLLE---------- 2216
            :.|.:|..|| ..:.:...:.||:.|         |......:|:....|..:||          
Yeast   755 YSQTLSSMDLQNAIKDEEDMLILKQLLSTYTPTVTPETSAALEYKIWQSRRKVLEEEKASDWQIE 819

  Fly  2217 -----FPLAINPSGAARTEPKQR---QLLVWRKPHTQR-----------------TAGSCSTQRM 2256
                 |...:.|..:.:.|..::   :|.:...||.:|                 |...|..:..
Yeast   820 LNGTLFDSELQPGSSFKAEGFRKIADKLKINYLPHRRRVHQPLNTVNIHNERNEYTPELCQREES 884

  Fly  2257 AN---SAAIAGEVA---------------CPYSKQFVHSKS-----SQYKKMKQEWRNNVYLARS 2298
            :|   |.::..||:               ....|..:.::|     :|..|.|:.    |..|||
Yeast   885 SNKEPSDSVPQEVSSSRDNRASNRRFQQDIEAQKAAIGTESELLSLNQLNKRKKP----VMFARS 945

  Fly  2299 KIQGLGLYAARDIEKHTMIIEYIGEVIRTEVSEIREKQYESKNRG-IYMFRLDEDRVVDATLSGG 2362
            .|...||||...|....|||||:||.||..|:|:|||:|.....| .|:||:||:.|:|||..||
Yeast   946 AIHNWGLYALDSIAAKEMIIEYVGERIRQPVAEMREKRYLKNGIGSSYLFRVDENTVIDATKKGG 1010

  Fly  2363 LARYINHSCNPNCVTEIVEVDRDVRIIIFAKRKIYRGEELSYDYKFDIE-DESHKIPCACGAPNC 2426
            :||:|||.|:|||..:|::|....||:|:|.|.|...|||:|||||:.| |:..::||.||||||
Yeast  1011 IARFINHCCDPNCTAKIIKVGGRRRIVIYALRDIAASEELTYDYKFEREKDDEERLPCLCGAPNC 1075

  Fly  2427 RKWMN 2431
            :.::|
Yeast  1076 KGFLN 1080

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trrNP_726773.2 PHA03255 184..>320 CDD:165513
ePHD2_KMT2C_like 1898..2002 CDD:277136
FYRN 2068..2118 CDD:283589
FYRC 2126..2215 CDD:197781 10/52 (19%)
SET <2266..2431 CDD:225491 78/186 (42%)
SET 2291..2413 CDD:214614 63/123 (51%)
PostSET 2415..2431 CDD:214703 8/15 (53%)
SET1NP_011987.1 RRM_scSet1p_like 246..360 CDD:409743
SET_assoc 422..486 CDD:403081
SET 612..1080 CDD:225491 102/328 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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