DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trr and EFS

DIOPT Version :10

Sequence 1:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster
Sequence 2:NP_177854.6 Gene:EFS / 844066 AraportID:AT1G77300 Length:1805 Species:Arabidopsis thaliana


Alignment Length:1233 Identity:222/1233 - (18%)
Similarity:405/1233 - (32%) Gaps:450/1233 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1317 YIQGA--ASGTGHVITSTGQGVTL------GGVGA------STGASSSPMLKKRVRKFSKVEEDH 1367
            |::.|  ..|.|.::.|....:|.      ||:.:      :...:.:|.| |.||: .:::.|.
plant   265 YLEDAIDIEGNGTIVVSPSLAITEMLNNDDGGLCSHDLNKITVTETINPDL-KLVRE-DRLDTDL 327

  Fly  1368 DAFTEKLL-THIRQMQPLQVLEPHLNRNFHFLIGSNETSGGGSPASMSSAASAGSSSAGGGKLKG 1431
            ....||:| .|:                           |..|..|..:|.|..:..|...:.:.
plant   328 SVMNEKMLKNHV---------------------------GDSSSESAVAALSMNNGMAADLRAEN 365

  Fly  1432 GSRGWPLSRHLEGLED----CDGTVLGRY------GRVNLPGIPSLYDSERFGGSRGLVGGSART 1486
            .|:..|:......:|.    .|.:::..:      |.:.:....:..:..|.....|.:||...:
plant   366 FSQSSPIDEKTLDMEANSPITDSSLIWNFPLNFGSGGIEVCNPENAVEPLRIVDDNGRIGGEVAS 430

  Fly  1487 RSPSPAESPGAEKMLPMSSIQNDFYD---------QEFSTHMERNPRER-LVRHIGAVKDCNLE- 1540
            .|.|.....|      |||.:....|         :..:.|:.::.|:: ..|.|.::..|:.: 
plant   431 ASGSDFCEAG------MSSSRRKARDGKQCKVVQTKTSARHLRKSSRKKQSERDIESIFKCSKQK 489

  Fly  1541 TVDLVESEGVAAWATLPRLTRYPGLILLNGNSRCHGRMSPVALPEDPLTMRFPVSPLLRSCGEEL 1605
            ...|:::...:.|....:.|.    |.|..|:          :|.|               |...
plant   490 RSSLLKTSRSSEWGLPSKTTE----IFLQSNN----------IPYD---------------GPPH 525

  Fly  1606 RKTQQMELGMGPLGNNNNNNYQQKNQNVILALPASASENIAGVLRDLANLLHLAPALTCKIIEDK 1670
            .:.|:.:      ||.||..:.:.:.|          .|:.|..|::.     |.:.:|..::.|
plant   526 HEPQRSQ------GNLNNGEHNRSSHN----------GNVEGSNRNIQ-----ASSGSCLRLKVK 569

  Fly  1671 I-----------------GNKL---------------------EDQFMN-QDDEKHVDFKRPLSQ 1696
            .                 ||.|                     ||:... :..|..|:...|:.:
plant   570 FGKSGGQNPLNITVSKVSGNSLPGNGIVKAGTCLELPGSAHFGEDKMQTVETKEDLVEKSNPVEK 634

  Fly  1697 VSHGHLRKILNGRRK--------LCRSCGNVV-----HATGLRVPRHSVPALEEQLPRLAQLMDM 1748
            ||  :|:...:.|.|        |||..|..|     |.:.:|:       :||           
plant   635 VS--YLQSSDSMRDKKYNQDAGGLCRKVGGDVLDDDPHLSSIRM-------VEE----------- 679

  Fly  1749 LPRKSVPPPFVYFCDRACFARFKWNGKDGQAEAASLLLQPAGGSAV--KSSNGDSPGSFCASSTA 1811
                         |:||...:    ..|.:....|.::.....|.|  :...|...|.|    :.
plant   680 -------------CERATGTQ----SLDAETSPDSEVINSVPDSIVNIEHKEGLHHGFF----ST 723

  Fly  1812 PAEMVVKQ---EPEDE--DEKTPSVPGNPTNIPAQRKCIVKCFSADCFTTDSAPSGLELDGTAGA 1871
            |.::|.|.   |.|||  ..|:||..|:.. ||..:|.             ..|.      :...
plant   724 PEDVVKKNRVLEKEDELRASKSPSENGSHL-IPNAKKA-------------KHPK------SKSN 768

  Fly  1872 GTGAGPVNNTVWETETSGLQLE-----DTRQCVFCNQRGDGQADGP-----------SRLLNFDV 1920
            ||..|  .:...|:...|.:.|     :.|:.:..:. |...:|.|           ..||:.|:
plant   769 GTKKG--KSKFSESAKDGRKNESHEGVEQRKSLNTSM-GRDDSDYPEVGRIESHKTTGALLDADI 830

  Fly  1921 DKWVHLNCALWSNGVYETVSGALMNFQTALQAGLSQACSACHQPGATIKCFKSRCNSLYHLPCAI 1985
            .|         ::..|.|:|..:.:.:..:...:..:.|.   ..|.::|               
plant   831 GK---------TSATYGTISSDVTHGEMVVDVTIEDSYST---ESAWVRC--------------- 868

  Fly  1986 REECVFYKNKSVHCSVHGHAHAGITMGAGAGATTGAGLGGSVADNELSSLVVHRRVFVDRDENRQ 2050
             ::|  :|.:.:..||                      .||:.::.       |.:.::..:.| 
plant   869 -DDC--FKWRRIPASV----------------------VGSIDESS-------RWICMNNSDKR- 900

  Fly  2051 VATVMHYSELSNLLRVGNMTF---LNVGQLLPHQLEAFHTPHYIYPIGYKVSRYYWCVRRPNRRC 2112
                  :::.|....:.|...   |.:||   .:.:|                            
plant   901 ------FADCSKSQEMSNEEINEELGIGQ---DEADA---------------------------- 928

  Fly  2113 RYICSIAEAGCKPEFRIQVQDAGDKEPEREFRGSSPSAVWQQIL--QPITRLRKVHKWLQLFPQH 2175
             |.|..|:.|            .:||.:.:.......|.::.|.  |.:.|.||.....::...|
plant   929 -YDCDAAKRG------------KEKEQKSKRLTGKQKACFKAIKTNQFLHRNRKSQTIDEIMVCH 980

  Fly  2176 I--SGEDLFGLTEPAIVRILESLPGIETLTDYRFKYGRNPLLEFPLAINPSGAARTEPKQRQLLV 2238
            .  |.:...|..|..:.|:|    .||.|                                    
plant   981 CKPSPDGRLGCGEECLNRML----NIECL------------------------------------ 1005

  Fly  2239 WRKPHTQRTAGSCSTQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWRNNVYLARSKIQGL 2303
                     .|:|.          ||::..  ::||...|..::::.           :|..:|.
plant  1006 ---------QGTCP----------AGDLCS--NQQFQKRKYVKFERF-----------QSGKKGY 1038

  Fly  2304 GLYAARDIEKHTMIIEYIGEVIRTEVSEIREKQYESK-NRGIYMFRLDEDRVVDATLSGGLARYI 2367
            ||....|:.:...:|||:|||:..:..|.|:|:|..| .:..|...|:.:.|:||...|.|.|:|
plant  1039 GLRLLEDVREGQFLIEYVGEVLDMQSYETRQKEYAFKGQKHFYFMTLNGNEVIDAGAKGNLGRFI 1103

  Fly  2368 NHSCNPNCVTEIVEVDRDVRIIIFAKRKIYRGEELSYDYKFDIEDESHKIPCACGAPNCRKWM 2430
            ||||.|||.||...|:.::.:.||:.:.:.:|:||::||.:.....:....|.||:.:||.::
plant  1104 NHSCEPNCRTEKWMVNGEICVGIFSMQDLKKGQELTFDYNYVRVFGAAAKKCYCGSSHCRGYI 1166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trrNP_726773.2 PHA03255 184..>320 CDD:165513
PRK13914 <623..>851 CDD:237555
ePHD2_KMT2C_like 1898..2002 CDD:277136 16/114 (14%)
FYRN 2067..2118 CDD:461787 7/53 (13%)
FYRC 2126..2215 CDD:197781 17/92 (18%)
SET_KMT2C_2D 2278..2430 CDD:380948 48/152 (32%)
EFSNP_177854.6 zf-CW 865..910 CDD:462181 10/98 (10%)
AWS 975..1025 CDD:197795 15/110 (14%)
SET_SETD2 1025..1167 CDD:380949 47/153 (31%)
Blue background indicates that the domain is not in the aligned region.

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