DRSC/TRiP Functional Genomics Resources

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Protein Alignment trr and SDG25

DIOPT Version :10

Sequence 1:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster
Sequence 2:NP_001318731.1 Gene:SDG25 / 834246 AraportID:AT5G42400 Length:1388 Species:Arabidopsis thaliana


Alignment Length:541 Identity:146/541 - (26%)
Similarity:208/541 - (38%) Gaps:155/541 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1967 TIKCFKSRCNSLYHLPCAIREECVFYKNKSVHCSVHGHAHAGITMGAGAGATTGA-----GLGGS 2026
            |:.| |....||.:.|.        .|.|..|.|.....:.......|..:..||     .:.|.
plant   927 TVDC-KDHEESLSNKPS--------QKVKKAHTSKLKRKNLSDARDEGTKSCNGAVKSFTEISGK 982

  Fly  2027 VADNE-----LSSLVVHRRVFVDRDENRQVATVMHYSELSNLLRVGNMTFLNVGQLLPHQLEAFH 2086
            ..|.|     :|..|.|:.:    .:.|:.....:..::||  ..||...|..|:....      
plant   983 EGDTESLGLAISDKVSHQNL----SKRRKKDAAKNGQDMSN--PTGNPPRLAEGKKFVE------ 1035

  Fly  2087 TPHYIYPIGYKVSRYYWCVRRPNRRCRYICSIAEAGCKPEFRIQVQDAGDKEPEREFRGSSPSAV 2151
                                      :..|||::.|                     |.||.|::
plant  1036 --------------------------KSACSISQKG---------------------RKSSQSSI 1053

  Fly  2152 WQQILQPITRLRKVHKWLQLFPQHISGEDLFGLTEPAIVRILESLPGIETLTDYRFKYGRNPLLE 2216
            .::..|...::..|....:|.......||.. :.|...||..|.|| ..| :|...|.|.|.|:.
plant  1054 LKRKHQLDEKISNVPSRRRLSLSSTDSEDAV-IKEDYDVRNEEKLP-CHT-SDKLQKVGPNKLIR 1115

  Fly  2217 -------------------------FPLAINPSGAARTEPKQRQLLV-----------------W 2239
                                     .|:|:.|.....::|.:::|.:                 |
plant  1116 RRKPLAKHTTERSPIKDLSVDDGRPKPIALKPLEKLSSKPSKKKLFLSIPKSDGCARTSINGWHW 1180

  Fly  2240 RK------------------PHTQRTAGSCS-TQRM----ANSAAIAGEVACPYSKQFVHSKSSQ 2281
            ..                  .|.|......| ||.:    .|.|.:...:|.......:  |.||
plant  1181 HAWSLKASAEERARVRGSSCVHMQHFGSKSSLTQNVLSARTNRAKLRNLLAAADGADVL--KMSQ 1243

  Fly  2282 YKKMKQEWRNNVYLARSKIQGLGLYAARDIEKHTMIIEYIGEVIRTEVSEIREKQYESKNRG-IY 2345
            .|..|:..|    ..:|||...||.|...||....:|||:||:||:.:|||||:|||....| .|
plant  1244 LKARKKHLR----FQQSKIHDWGLVALEPIEAEDFVIEYVGELIRSSISEIRERQYEKMGIGSSY 1304

  Fly  2346 MFRLDEDRVVDATLSGGLARYINHSCNPNCVTEIVEVDRDVRIIIFAKRKIYRGEELSYDYKFDI 2410
            :||||:..|:|||..||:||:|||||.|||.|:|:.|:...:|.|:|||.|..|||:||:|||.:
plant  1305 LFRLDDGYVLDATKRGGIARFINHSCEPNCYTKIISVEGKKKIFIYAKRHIDAGEEISYNYKFPL 1369

  Fly  2411 EDESHKIPCACGAPNCRKWMN 2431
            ||:  ||||.||||.||..:|
plant  1370 EDD--KIPCNCGAPKCRGSLN 1388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trrNP_726773.2 PHA03255 184..>320 CDD:165513
PRK13914 <623..>851 CDD:237555
ePHD2_KMT2C_like 1898..2002 CDD:277136 10/34 (29%)
FYRN 2067..2118 CDD:461787 5/50 (10%)
FYRC 2126..2215 CDD:197781 20/88 (23%)
SET_KMT2C_2D 2278..2430 CDD:380948 80/152 (53%)
SDG25NP_001318731.1 SET_SETD1 1237..1384 CDD:380946 78/154 (51%)
Blue background indicates that the domain is not in the aligned region.

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